AMCG00019581


Basic Information

Item Value
gene id AMCG00019581
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 30854938 ~ 30857867 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019581
CCGGAACTGCGCAAGCCAACCGCAGCGCCCTGTAGCATACACCTTCcctaagaaataattaatattacaaatgcGTCAAACATTGACATTCCTTGGAGGTCAATCTACTACATAAATACTGCCCAGCGCTGCCAAAGCCATTCTACTCCAAAACACGAGCTTACACAGTACCCCTGctcttgtatttattgtatttatttatttggtaatGCGTGGATTATTATCTCTGAGATATCCTGGGGTGGCAGCAGTGGCCCAGGTCCTTCTGGCCCTTTCCCAGGGCTCTCCACTTCACGCTCCCGAGCCGCTGGTGTGTGCGCCCTGCACCGCGGACACCCTGCTCCAGTGCCCCGCCGTGGCGCCGGACTGCGCCGAGGTGCTGAAGGAGCCGGGCTGCGGCTGCTGCTACGCCTGTGCCCTGCAGAAGGGCGCCCTGTGCGGGGTGTACACGGCCCGCTGCGGCACTGGCTTGCGATGCCACCCGCAGCTGGGCGAACAGCGACCTCTCCATGCGCTGATCCGAGGCCACGCCGTGTGCATGGAGCCGTCAGAAGCCGCCAGGATCCAGGCTGTGCAGGCTGCAGaaaatgaaaatgctaagAACATGGCTGTGGACCGAGACCAGGTGTCTCTTCAGTACCGCCTGGGCCACGTCACGCACAGCAAGCCCTTCGAGCCCAGAGAGGCGACAGAAGCCCAGGAGAGCATGAAAGCCAATATCAATGCCAACCGAAAGAAACTCATGGAGCAGGGTCCATGCCAAGTTGATCTACATAGAGCCCTGGAAAAGATTACAAAATCCCAGCAGAAGACTAAGTTTTATCTTCCCAACTGTGACAAACACGGGTTCTATAACCCTAAACAGTGTGAGACATCTCTAGAAAGCCAAAGGGGAAAGTGTTGGTGTGTCACACCTTGGAATGGTAAAATGATTGCTGGATCTCTGGATCTCCCAGGAGAAATGGACTGCCAGCAATACCCATCTTTGGTTGGACAGGAATAAATTCACAGATTCAATTCTTGTTTAATTTCACCTTGTGTATTTAGAATAGTTCACCAGTTCACAGacacttttttaatatgtatctatttttaaagttgtatttatttgtttcagttcagAAAATGTATCTTCTGAAACTTTCACAGAACTTAAAAGactatttaacaaatatatccttatttattttctttcaatatgcAATgggtatacatattttttataaacgGTGgccttatttgtattatttcattgtaAATAGTAAGACATTGTACATAACTGTATAAATCACCATGATTACCTCACCTAAGtgttttctcaagttttttttaatattgacttttttttagaaataaaataaatataaatgttaatgtgTTATTGTAAATGCTAAAACAAAGTGCACTGCAAAAACTATTTTATCATTTCATGTTGATTCACTATCCAGACAATGTCTGCTATGGCTATGTGCAGTTGCACAACATGTGGAtgcacaatatgtatatatatatatatgcacacacacaaatatgtaatgACTTGACTTGCTGCTACAAGAAAGCTGCTATCATTGTGCTTTACCTTAAGCCAATACTTAATCACTtgaatatattacttttattagttaacttttattattattacaaaatattgtaaaatgatttaataaaggTTTTCACCACGA

Function

GO: NA

KEGG:

id description
K23578 IGFBP1; insulin-like growth factor-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019581 True 1685 mRNA 0.43 4 30854938 30857867

Neighbor

gene id symbol gene type direction distance location
AMCG00019576 NA coding downstream 225383 30628722 ~ 30629555 (-)
AMCG00019575 NA coding downstream 263658 30577177 ~ 30591280 (-)
AMCG00019573 tbb2c,LOC107393497,LOC105029894,LOC105891054,LOC105023713,LOC106593669,LOC106575097 coding downstream 286749 30566036 ~ 30568189 (-)
AMCG00019572 NA coding downstream 377891 30473446 ~ 30477047 (-)
AMCG00019571 irf4a,irf4,LOC108267998,LOC107565529 coding downstream 392738 30448193 ~ 30462200 (-)
AMCG00019582 NA coding upstream 18384 30876251 ~ 30894784 (-)
AMCG00019583 LOC103354709,LOC102798054 coding upstream 50997 30908864 ~ 30919174 (-)
AMCG00019584 adcy1,LOC103399855,LOC105011947 coding upstream 89840 30947707 ~ 30979946 (-)
AMCG00019585 NA coding upstream 214309 31072176 ~ 31078281 (-)
AMCG00019590 NA coding upstream 401942 31259809 ~ 31289751 (-)
G35243 NA non-coding downstream 180055 30592941 ~ 30674883 (-)
G35214 NA non-coding downstream 334474 30507070 ~ 30520464 (-)
G35190 NA non-coding downstream 412348 30412198 ~ 30442590 (-)
G35157 gmds,LOC107721371,LOC107556133 non-coding downstream 728608 30081650 ~ 30126330 (-)
G35145 NA non-coding downstream 1007080 29847644 ~ 29847858 (-)
G35304 NA non-coding upstream 179257 31037124 ~ 31037337 (-)
G35397 mak,ick non-coding upstream 550115 31407982 ~ 31410657 (-)
G35448 NA non-coding upstream 888758 31746625 ~ 31746866 (-)
G35458 NA non-coding upstream 1214190 32072057 ~ 32072286 (-)
G35471 NA non-coding upstream 1324157 32182024 ~ 32183570 (-)
G35101 NA other downstream 1169636 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 1208975 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 1304776 29535744 ~ 29550162 (-)
G35067 NA other downstream 1332954 29517996 ~ 29521984 (-)
AMCG00019500 pign other downstream 6760274 24052011 ~ 24094664 (-)
AMCG00019597 NA other upstream 564162 31422029 ~ 31427583 (-)
G35476 LOC107575789 other upstream 1364197 32222064 ~ 32233398 (-)
AMCG00019645 NA other upstream 3652866 34510733 ~ 34522270 (-)
G35867 NA other upstream 4197152 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 5076929 35934796 ~ 35981536 (-)

Expression


Co-expression Network