AMCG00019582


Basic Information

Item Value
gene id AMCG00019582
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 30876251 ~ 30894784 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019582
GGTGCCTCACAATACAAATTCGaaccattttgtgtgtgttcatagtGGTTTTAATATACTCTGTCGCACAAGGATATGTGGTTGCTTGTATGCCGTGGATGTGGAACAGCAATTCCAGCAGTTCTATATTGATCATTGACTCCAATGGAGTGAATAAAACCATGATGGAGCTGCCGTGTGATACAGCTCACTACGCCTTCCTCTCCTGTGTAGTCGGGACTCTCACCCTTGCAATATTTCTTCGAGTTTCCTCATTGCCAAAAATGATTCTGCTCTTCCTTGTCAGTGTCTTGTACATAGTGATTCTGGAAATCAGTGGTTTCAGAAAATCAGTGGGtgGAGGGTCTTTTTACATCCGTGGATATGAACCGATCTTAGCCATTCTGATCTTTGCATCTGCATTGGCTCTTCACTCCAGGCAACTAGACCTTAAATTGCaagagagagatgaCATGGAAAGAGTAAAGCTTGATAAcaaaaggattttatttaacCTCCTCCCTGCACATGTTGCACAGCACTTTCTAATGTCCAACCCCAGAAATATGGACCTTTACTATCAATCATATTCTCAAGTGGGGGTGATGTTTGCTTCCATTCCCAATTTCAATGATTTCTACATCGAACTGGATGGTAATAACATGGGTCTCATGGACAAAGAATGCTACAAGGACATAGAGAAGATAAAGACTATTGGCAGTACTTATATGGCAGCTGTAGGGTTAGTGCCTACTACTGGAACTAAGgccaaaaaatctatttactCTCACTTAAGTACAGTCGCAGATTTTGCAATAGAGATGTTTGATGTACTTGACGAAATCAACTACCAGTCATATAACGACTTTGTGTTAAGAGTTGGTATTAATGTTGGACCCGTGGTTGCTGGAGTTATTGGTGCAAGGAGACCACAATATGACATATGGGGAAACACAGTTAATGTCGCTAGCAGAATGGATAGTACTGGGGTTACAGAGGAAGTGTATCGAATGCTGAAGAAGTGTAATTATGATCTTGTGTGCCGTGGGCAGGTCAGCGTGaaaggcaaaggagaaatgctgaCGTATTTTCTGGATGGGAAATGCAGTGATACTAACTCACAGACTAAGTCGACGAGTCTGGAACATAAAATGTACCCATATGGACGAGCCAACATCAAAACGAAGCTGGGAACTAGTTGTCCTTCAGTGTCATCCGTCGCAAGTTTCACGGTAAAAGCAGGCCTCGGGACGCTGCAGGCCTCGACGACACACGCAAATCAGACTGTGCTTTACCTTCCATCAGTGCCAGCTGTGAAGGAAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019582 True 1304 mRNA 0.43 9 30876251 30894784

Neighbor

gene id symbol gene type direction distance location
AMCG00019581 NA coding downstream 18384 30854938 ~ 30857867 (-)
AMCG00019576 NA coding downstream 246696 30628722 ~ 30629555 (-)
AMCG00019575 NA coding downstream 284971 30577177 ~ 30591280 (-)
AMCG00019573 tbb2c,LOC107393497,LOC105029894,LOC105891054,LOC105023713,LOC106593669,LOC106575097 coding downstream 308062 30566036 ~ 30568189 (-)
AMCG00019572 NA coding downstream 399204 30473446 ~ 30477047 (-)
AMCG00019583 LOC103354709,LOC102798054 coding upstream 14080 30908864 ~ 30919174 (-)
AMCG00019584 adcy1,LOC103399855,LOC105011947 coding upstream 52923 30947707 ~ 30979946 (-)
AMCG00019585 NA coding upstream 177392 31072176 ~ 31078281 (-)
AMCG00019590 NA coding upstream 365025 31259809 ~ 31289751 (-)
AMCG00019592 NA coding upstream 421878 31316662 ~ 31340999 (-)
G35243 NA non-coding downstream 201368 30592941 ~ 30674883 (-)
G35214 NA non-coding downstream 355787 30507070 ~ 30520464 (-)
G35190 NA non-coding downstream 433661 30412198 ~ 30442590 (-)
G35157 gmds,LOC107721371,LOC107556133 non-coding downstream 749921 30081650 ~ 30126330 (-)
G35145 NA non-coding downstream 1028393 29847644 ~ 29847858 (-)
G35304 NA non-coding upstream 142340 31037124 ~ 31037337 (-)
G35397 mak,ick non-coding upstream 513198 31407982 ~ 31410657 (-)
G35448 NA non-coding upstream 851841 31746625 ~ 31746866 (-)
G35458 NA non-coding upstream 1177273 32072057 ~ 32072286 (-)
G35471 NA non-coding upstream 1287240 32182024 ~ 32183570 (-)
G35101 NA other downstream 1190949 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 1230288 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 1326089 29535744 ~ 29550162 (-)
G35067 NA other downstream 1354267 29517996 ~ 29521984 (-)
AMCG00019500 pign other downstream 6781587 24052011 ~ 24094664 (-)
AMCG00019597 NA other upstream 527245 31422029 ~ 31427583 (-)
G35476 LOC107575789 other upstream 1327280 32222064 ~ 32233398 (-)
AMCG00019645 NA other upstream 3615949 34510733 ~ 34522270 (-)
G35867 NA other upstream 4160235 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 5040012 35934796 ~ 35981536 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G2109929 adcy1 non-coding NC_048592.1 CM023246.2 15891991 ~ 15892732 (-)