AMCG00019583 (LOC103354709,LOC102798054)


Basic Information

Item Value
gene id AMCG00019583
gene name LOC103354709,LOC102798054
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 30908864 ~ 30919174 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019583
GTCAGTGGCCGAAGCCACAGAGGTGGATTTGAACATGCGAGTTGGCCTCCACACAGGCAGGGTGCTCTGTGGGGTTCTTGGGCTCCGTAAGTGGCAATACGATGTCTGGTCCAACGATGTAACATTGGCCAATGTAATGGAAGCTGGTGGATTACCTGGGAAGGTTCATATCACAAAGACTACTCTCGAGTGCCTCAATGGAGACTACGAAGTTGAGCCTGGGTATGGCCATGAGAGAAAtacttttcttcagaaacacaaTATTGAAACCTTTTTTATTGTGCCATCCCATCGACGCAAGATATTCCCTGGATTAATCCTTTCTGATATAAAACCTGCTAAAAGGATGAAATTCAAAACTGTTTGCTACTTACTAGTCCAGCTCATGCATTGCAGAAAGATGTTCAAAGCTGAGATTCCCTTTTCAAACGTCATGACCTGTGAAGATGATGACAAGAGAAGGGCGCTCAGAACTGCTTCTGAAAAGTTAAGGAATCGTACATCCTTTTCCACTAATGTAATACACAACACGCCCGGCACCAGAGTAAACAGGTATATCGGCCGCCTAATTGAAGCTCGACAGACTGAGTCAGAAATGGCAGATTTACATTTCATCACATTAATGTACAAACGTGCTGAGCGGGAGCAGAAATATCATCAGCTTCACGATGAGTACTTCACCAGTGCAGTAATTCTCTCACTCATTCTGGCTGCCTTATTTGGTCTTGTCTACCTTCTAATAATACCACAGTATGTATCACCTGTCATAAATATTTACTTCTCCATGTCTTCATACAGATttgactttatt

Function

NR:

description
PREDICTED: adenylate cyclase type 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019583 True 811 mRNA 0.43 5 30908864 30919174

Neighbor

gene id symbol gene type direction distance location
AMCG00019582 NA coding downstream 14080 30876251 ~ 30894784 (-)
AMCG00019581 NA coding downstream 50997 30854938 ~ 30857867 (-)
AMCG00019576 NA coding downstream 279309 30628722 ~ 30629555 (-)
AMCG00019575 NA coding downstream 317584 30577177 ~ 30591280 (-)
AMCG00019573 tbb2c,LOC107393497,LOC105029894,LOC105891054,LOC105023713,LOC106593669,LOC106575097 coding downstream 340675 30566036 ~ 30568189 (-)
AMCG00019584 adcy1,LOC103399855,LOC105011947 coding upstream 28533 30947707 ~ 30979946 (-)
AMCG00019585 NA coding upstream 153002 31072176 ~ 31078281 (-)
AMCG00019590 NA coding upstream 340635 31259809 ~ 31289751 (-)
AMCG00019592 NA coding upstream 397488 31316662 ~ 31340999 (-)
AMCG00019598 NA coding upstream 510147 31429321 ~ 31432563 (-)
G35243 NA non-coding downstream 233981 30592941 ~ 30674883 (-)
G35214 NA non-coding downstream 388400 30507070 ~ 30520464 (-)
G35190 NA non-coding downstream 466274 30412198 ~ 30442590 (-)
G35157 gmds,LOC107721371,LOC107556133 non-coding downstream 782534 30081650 ~ 30126330 (-)
G35145 NA non-coding downstream 1061006 29847644 ~ 29847858 (-)
G35304 NA non-coding upstream 117950 31037124 ~ 31037337 (-)
G35397 mak,ick non-coding upstream 488808 31407982 ~ 31410657 (-)
G35448 NA non-coding upstream 827451 31746625 ~ 31746866 (-)
G35458 NA non-coding upstream 1152883 32072057 ~ 32072286 (-)
G35471 NA non-coding upstream 1262850 32182024 ~ 32183570 (-)
G35101 NA other downstream 1223562 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 1262901 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 1358702 29535744 ~ 29550162 (-)
G35067 NA other downstream 1386880 29517996 ~ 29521984 (-)
AMCG00019500 pign other downstream 6814200 24052011 ~ 24094664 (-)
AMCG00019597 NA other upstream 502855 31422029 ~ 31427583 (-)
G35476 LOC107575789 other upstream 1302890 32222064 ~ 32233398 (-)
AMCG00019645 NA other upstream 3591559 34510733 ~ 34522270 (-)
G35867 NA other upstream 4135845 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 5015622 35934796 ~ 35981536 (-)

Expression


Co-expression Network