Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019592 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 31316662 ~ 31340999 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0009887 | animal organ morphogenesis | biological_process |
| GO:0051216 | cartilage development | biological_process |
| GO:0009957 | epidermal cell fate specification | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019592 | True | 1320 | mRNA | 0.46 | 13 | 31316662 | 31340999 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019590 | NA | coding | downstream | 26911 | 31259809 ~ 31289751 (-) |
| AMCG00019585 | NA | coding | downstream | 238381 | 31072176 ~ 31078281 (-) |
| AMCG00019584 | adcy1,LOC103399855,LOC105011947 | coding | downstream | 336716 | 30947707 ~ 30979946 (-) |
| AMCG00019583 | LOC103354709,LOC102798054 | coding | downstream | 397488 | 30908864 ~ 30919174 (-) |
| AMCG00019582 | NA | coding | downstream | 421878 | 30876251 ~ 30894784 (-) |
| AMCG00019598 | NA | coding | upstream | 88322 | 31429321 ~ 31432563 (-) |
| AMCG00019596 | NA | coding | upstream | 115129 | 31456128 ~ 31467641 (-) |
| AMCG00019599 | NA | coding | upstream | 180565 | 31521564 ~ 31529426 (-) |
| AMCG00019608 | NA | coding | upstream | 904833 | 32245832 ~ 32246580 (-) |
| AMCG00019606 | NA | coding | upstream | 956478 | 32297477 ~ 32307436 (-) |
| G35304 | NA | non-coding | downstream | 279325 | 31037124 ~ 31037337 (-) |
| G35243 | NA | non-coding | downstream | 641779 | 30592941 ~ 30674883 (-) |
| G35214 | NA | non-coding | downstream | 796198 | 30507070 ~ 30520464 (-) |
| G35190 | NA | non-coding | downstream | 874072 | 30412198 ~ 30442590 (-) |
| G35157 | gmds,LOC107721371,LOC107556133 | non-coding | downstream | 1190332 | 30081650 ~ 30126330 (-) |
| G35397 | mak,ick | non-coding | upstream | 66983 | 31407982 ~ 31410657 (-) |
| G35448 | NA | non-coding | upstream | 405626 | 31746625 ~ 31746866 (-) |
| G35458 | NA | non-coding | upstream | 731058 | 32072057 ~ 32072286 (-) |
| G35471 | NA | non-coding | upstream | 841025 | 32182024 ~ 32183570 (-) |
| G35481 | NA | non-coding | upstream | 944417 | 32285416 ~ 32285686 (-) |
| G35101 | NA | other | downstream | 1631360 | 29679229 ~ 29685302 (-) |
| AMCG00019554 | zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 | other | downstream | 1670699 | 29638566 ~ 29645963 (-) |
| AMCG00019556 | NA | other | downstream | 1766500 | 29535744 ~ 29550162 (-) |
| G35067 | NA | other | downstream | 1794678 | 29517996 ~ 29521984 (-) |
| AMCG00019500 | pign | other | downstream | 7221998 | 24052011 ~ 24094664 (-) |
| AMCG00019597 | NA | other | upstream | 81030 | 31422029 ~ 31427583 (-) |
| G35476 | LOC107575789 | other | upstream | 881065 | 32222064 ~ 32233398 (-) |
| AMCG00019645 | NA | other | upstream | 3169734 | 34510733 ~ 34522270 (-) |
| G35867 | NA | other | upstream | 3714020 | 35055019 ~ 35055444 (-) |
| AMCG00019665 | NA | other | upstream | 4593797 | 35934796 ~ 35981536 (-) |
