AMCG00019594 (mak)


Basic Information

Item Value
gene id AMCG00019594
gene name mak
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 31413792 ~ 31423515 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019594
TGCCAAAGTAGTGGTATCACAAGCCCTTTGgaaaagcatgtttatttttatgcactTTTCTCATCTTATTTCTTTCCTATCTTCTACCTATTTGCTGCCAGAGAAAATAagatgttttctgaaaatgaaataaggAACATAATGTTCCAAGTGATCTCTGGCTTAGCCTTTGTGCATAAGCATGGGTTTTTCCATCGTGATATGAAACCTGAAAACTTGCTTTGCATGGGTCCTGAACTTGTGAAGATTGCAGACTTTGGATTAGCAAGGGAGATCAGATCACGTCCTCCATATACAGACTATGTGTCGACTAGATGGTACCGTGCTCCTGAGGTGCTGCTGAGATCATCAGTCTACAGCTCTCCCATTGACATATGGGCAGTGGGCTGTATAATGGCTGAGCTTTACACACTTAGGCCGCTGTTCCCCGGGAACAGTGAAGTTGATGAGATTTTCAAGATTTGCCAAGTTCTAGGAACAGTGAAAAAGAGTGACTGGCCAGAAGGCTACCAGCTGGCTTCAGCAATGAATTTCCGCTTCCCTCAGTGTGTTCCAACAAACCTTAAAACGCTCATTCCCAACGCCAGCAGCGAAGCCATAGCTCTAATGAGGGACATGCTGCAGTGGGATCCCAAGAAAAGACCAACAGCTGTTCAGGCTCTCCGGTACCCTTACTTTCAAGTGGGCCAGGTATTAGGGCCTCCCCCACAGTACGTCGAGCAGCAGAAGGCCCAGAGCAAACAAGCCCAGTCCGCAGAACACAGGTCCCATTCCTTGAGCAAAGCGGACCTGAAGTCTCCTCCTGAGCCGGCCTTCAAGACACCAAACCAGCCAGCCCAGAGCAGAGCCCCCCACCAGCCGCTGCAGCAGATCCTGCTCCCACAGCAGTCCTTTCAGACCGGCCTCCAAACAGACCTGTCTAGACAAGAGCAGCCACTTCTGCCCAGCCTCAATAACAACTCCCCACCAAAACCCAGTATAGgatcaataaaagaaaaaagaaatgaggAATCTTTCTTTCGGTCTACAGAACAAAAACCTGTCAATGCATATGGTTCTGGAAACAAGGGAATATCCAGCACCACAGTAAACCGCATTGACTCAGGACAATCAAACTCGTCCTCAGCAAGACAGCACTACTTACGACAGTCAAGATATCTTCCTGGTGTAAATCCCAAGAACACCTCTTTAGTTACAAATAAGGAACTATCCCGAGATTTGTGGGGCAACACATCCACTTTAATCAGCAGACCACTGGGGCCTATTGGAGCAGGTCTGTCCATCACGAGAGTTAATGCAGGAAATTTTGTAGGCCCAAACTATAACTCTGCTGGAGCTTACATCCcttcatttcagaaaaaggagGTAGGATCTGCAGGACAAAGGATTCAGCTGGCACCCATTGGGGGTCCATCAGCAAattacGACGGATGGAGGAGCAAAGCTGCGAGATCCCAAATTCCAGGATCAAACTTCAACTCATCTGGGAAAAGCTCTGGCAGCCTTTTAGCCCGCGCTCCCCCAGTTCAGCCAGTGCACGGGAGAATCGACTGGGCATCCAAATATGGAAGCCATCGGTAGCAAAGATGTTCAGGACGTTTTCCATGAGGACCATGCTTAGGTGTTTGTAACCTAAGACTGAGCACTGTGAGGGAGAGACTGgttcaacagaagaaaaaacaaactaagcCTTTGGCTGTGCATCCAAATCAACCAGAAACTTCCATTTCTCTttaatgaataacaataattataaaccAATATGACATTTTTTTCCTAGATTTGATTTGGATTTCATCATATGCCATCTATACTGTACTTCACATCAGAGTATGTTCTGTTCTAAACTATTTAGTGTTGAACATTATAATTGTCTTTTAattgttgatttaaaatgtagtctttgaaattgtttacatttaatcaCTTAATACAATTCTACAATTCAGTTTTTATCTTGTTAAAAATACTTGGATGCTGCATGACACTGAATGCCTGTAATtgtttatatgaaaacaaagtgtaaacTAGGAATTCTCTCTGTTCAGAAAGGACCGCTGTTTTTAATTAGGCTTGCATTTTTGATCAAGAGTACAGAATATTTGCAAGTCAAAGCTTAAAAAGCTGGAACATTTTTCAGAATTATGTTGATGTAAACTTTCAAGtaaaattttaatatttaactattCTTTTAAAAGTTATTGTATTCTAC

Function

symbol description
mak Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in cilium assembly; intracellular signal transduction; and intraciliary transport. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cilium; cytoplasm; and nucleus. Is expressed in Kupffer's vesicle; retina; and retinal photoreceptor layer. Human ortholog(s) of this gene implicated in retinitis pigmentosa 62. Orthologous to human MAK (male germ cell associated kinase).

NR:

description
PREDICTED: serine/threonine-protein kinase MAK

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K08829 MAK; male germ cell-associated kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019594 True 2212 mRNA 0.43 10 31413792 31423515

Neighbor

gene id symbol gene type direction distance location
AMCG00019593 LOC106536843,LOC107396847,LOC103461601 coding upstream 66702 31339427 ~ 31347090 (+)
AMCG00019591 LOC101268971 coding upstream 101425 31289851 ~ 31312367 (+)
AMCG00019589 LOC108443237,LOC108248367,LOC103354712 coding upstream 159497 31251909 ~ 31254295 (+)
AMCG00019588 NA coding upstream 182860 31217704 ~ 31230932 (+)
AMCG00019587 NA coding upstream 299355 31113291 ~ 31114437 (+)
AMCG00019595 trnau1ap,LOC105019178,LOC106599269,LOC106569203 coding downstream 22124 31445639 ~ 31452178 (+)
AMCG00019600 tfap2a coding downstream 130039 31553554 ~ 31564293 (+)
AMCG00019601 NA coding downstream 255863 31679378 ~ 31716557 (+)
AMCG00019602 NA coding downstream 334570 31758085 ~ 31761946 (+)
AMCG00019603 slc35b3,LOC102782645 coding downstream 650693 32074208 ~ 32086763 (+)
G35388 NA non-coding upstream 10533 31399781 ~ 31403259 (+)
G35229 NA non-coding upstream 844725 30567876 ~ 30569067 (+)
G35166 NA non-coding upstream 1233432 30172410 ~ 30180360 (+)
G35085 NA non-coding upstream 1730356 29635708 ~ 29683436 (+)
G35031 rnf152,LOC103146929 non-coding upstream 2257605 29152700 ~ 29156187 (+)
G35447 NA non-coding downstream 323112 31746627 ~ 31746876 (+)
G35480 NA non-coding downstream 861929 32285444 ~ 32285688 (+)
G35485 NA non-coding downstream 873889 32297404 ~ 32306347 (+)
G35490 NA non-coding downstream 896033 32319548 ~ 32320956 (+)
G35527 NA non-coding downstream 1087166 32510681 ~ 32510949 (+)
AMCG00019551 lsm5 other upstream 2108786 29300955 ~ 29305006 (+)
AMCG00019535 NA other upstream 2702905 28613255 ~ 28710887 (+)
AMCG00019496 NA other upstream 7193801 24215877 ~ 24219991 (+)
AMCG00019492 NA other upstream 7327311 24045689 ~ 24086481 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other upstream 7717991 23672125 ~ 23695801 (+)
AMCG00019605 NA other downstream 886522 32310037 ~ 32317571 (+)
AMCG00019609 NA other downstream 900885 32324400 ~ 32392976 (+)
AMCG00019638 LOC107757182 other downstream 3030694 34454209 ~ 34578440 (+)
AMCG00019641 NA other downstream 3416801 34840316 ~ 34851323 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other downstream 4622962 36046477 ~ 36063850 (+)

Expression


Co-expression Network