AMCG00019596


Basic Information

Item Value
gene id AMCG00019596
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 31456128 ~ 31467641 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019596
CCCAAAACCACAGCTACATTGCACAAGTTGATCTTGACACGATTCAATGAGATTTAGGATGATAAAGAAAGGATTACAGTTTTGGCTATTGCTGCTGTCTGTTTGCTTTAGTCTTCTCATTGCGATGAGAGAGGTCATTATGGAAAACCAGAAGATGAATGAACGATCAAAGGAGTCTAAGATTTCAGATTACGTTTGCAGTGGATTTGTTCAAAGATCTAAACGCCTGACCTGGACAAGTCTTATGAAGCCTTCACCCCTCAATGTCTCCTGCGAGGAATACATCACCAACAGCCACTTCATCACCGAGACACTGTCCAGCGAGGAGGAGGCATATCCACTGGCCTTCATCATCACCGTGCATAAAGAGTTTGACATGTTTGAACGAGTCTTCAGGGCTATCTATGCCCCTCACAATGTGTACTGCATTCACATCGACGAGAAGGCAAGTAAGGCGTTTAAAGCCGCTGTAGAAACTCTGATAAACTGTTTCCCCAACTCTTTTCTTGCCTCTAAAATGGAAAGTGTTGTCTATGCGGGGATGTCCAGGCTCCAAGCAGATATTAACTGTTTGAAAGATTTGGTCTCGTCAGGTGTTCAATGGAAATATGTTATCAATTTGTGCGGGCAGGATTTCCCTTTGATGACCAACCTCGACATGATCCGGCATCTGAAGAGTTATAAGGAGAAGAACTTAACCCCTGGTATACTTCCAACACAGTTCAAGAAGCAGAGGATTGAATTTGTCCATCGGGAATATGTGGATAATAATAGTTCCAGAATTGTGAAAATCACCAAAACAAAATCTCCACCTCCTCATAATATTACAACTTATTCTGGCTCTGCATATTATGCTCTAACCCACGAATTTGCCACATTTGTATTACAAGACAAACGTGCAACAGATCTTTTGGAGTGGTCAAAAGATACCTACAGCCCCGATGAACAGTACTGGGTGACCTTAAATAGAATTCCAGATGCTCCTAATTCTATGCCAAATGGTAGATATGAAGGAAAAGTACGGGCCATTAAATGGATTGATCACAAAAAGCAGGTCTGCCATGgccGCTTTGTGCGAGGGGTTTGTGTGTACGGCCCCGGGGATCTGAAGTGGCTGTTTGAAAACCAACACATGTTTGCCAACAAGTTTGAATTGAAAACCTACCCCCCCACGGTGGAATGTCTAGAGCTGAAACTGAGGGAGCGTGCTCTAAACAACAGTGAGGTCACTCCACAACCCAGCTGGTACTTCtgaggtgaggtgaggtgaCCCCAGAACTTCAGTGACATACGTGTGCTTCGTGTCATGCAGTTCAAAGACTATCAGTGCACAGGAAGAAATTAAAGAACAATATTACTTTACAATATGGCCTTCTAAAGTTGCAACAAAAGTATGCACTTACAAATGtgcttaaataaattaacatgaatGGTCACTGAAATATGACACTTATGAAAGATAATCTGTACTTTTCTGTAAATGCAGGTTGTGATTTGGATGTTGCTCTGCCAAATACAGTTCCTCCATTCCATCTCCTCACAAAGCAAGATGACTAGATAAATGAACATGAATGGTCACTGAAATATGACACTTAGGAATGAAAATCTGTACTTTTCTCGATGAAAGCAAGAACACTGGAACACCTGCTGGAAAGAAAAATAGTCCATAAATTGCTACAAGATGACAGTGGTactcctttttatatattttaaagacgTTATATTGACTTCACTTGTGGTGTTTCCATTTTTTGTCTTTACTGGCAGTGTTTGGTGAGTTTGGTGAGAACAAAAAGCAATAAATGGTGATATATAGTATATTTCATGCctacttttaattatattatttgaatgcCTTTATCTTGATGTCACTAGAGCTATTCTGATTTTGAGAGTCCTTTTTATTTGCCTTACACAAATGAGACCATAAGGACACTGTAACATATAAACAATATGTGtagaaatacaatgaataaaacCTCTTATTGGAAATTGATGTCCCAAATGTGGGTTcttaaaaaaattgcattacAAGTTTTAGAACAGTGAAC

Function

GO: NA

KEGG:

id description
K00742 GCNT2; N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019596 True 2051 mRNA 0.40 3 31456128 31467641

Neighbor

gene id symbol gene type direction distance location
AMCG00019598 NA coding downstream 23565 31429321 ~ 31432563 (-)
AMCG00019592 NA coding downstream 115129 31316662 ~ 31340999 (-)
AMCG00019590 NA coding downstream 166377 31259809 ~ 31289751 (-)
AMCG00019585 NA coding downstream 377847 31072176 ~ 31078281 (-)
AMCG00019584 adcy1,LOC103399855,LOC105011947 coding downstream 476182 30947707 ~ 30979946 (-)
AMCG00019599 NA coding upstream 53923 31521564 ~ 31529426 (-)
AMCG00019608 NA coding upstream 778191 32245832 ~ 32246580 (-)
AMCG00019606 NA coding upstream 829836 32297477 ~ 32307436 (-)
AMCG00019607 NA coding upstream 849842 32317483 ~ 32325501 (-)
AMCG00019611 NA coding upstream 864815 32332456 ~ 32352846 (-)
G35397 mak,ick non-coding downstream 45471 31407982 ~ 31410657 (-)
G35304 NA non-coding downstream 418791 31037124 ~ 31037337 (-)
G35243 NA non-coding downstream 781245 30592941 ~ 30674883 (-)
G35214 NA non-coding downstream 935664 30507070 ~ 30520464 (-)
G35190 NA non-coding downstream 1013538 30412198 ~ 30442590 (-)
G35448 NA non-coding upstream 278984 31746625 ~ 31746866 (-)
G35458 NA non-coding upstream 604416 32072057 ~ 32072286 (-)
G35471 NA non-coding upstream 714383 32182024 ~ 32183570 (-)
G35481 NA non-coding upstream 817775 32285416 ~ 32285686 (-)
G35484 NA non-coding upstream 829212 32296853 ~ 32297284 (-)
AMCG00019597 NA other downstream 28545 31422029 ~ 31427583 (-)
G35101 NA other downstream 1770826 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 1810165 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 1905966 29535744 ~ 29550162 (-)
G35067 NA other downstream 1934144 29517996 ~ 29521984 (-)
G35476 LOC107575789 other upstream 754423 32222064 ~ 32233398 (-)
AMCG00019645 NA other upstream 3043092 34510733 ~ 34522270 (-)
G35867 NA other upstream 3587378 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 4467155 35934796 ~ 35981536 (-)
AMCG00019698 NA other upstream 6421803 37889444 ~ 38110224 (-)

Expression


Co-expression Network