AMCG00019598


Basic Information

Item Value
gene id AMCG00019598
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 31429321 ~ 31432563 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019598
GAATGGACGTCAGTGCCCGATTTCACGCACCACGCTCACACTGCGTGTTTGTCCGCAGTGGCAGCCAATGAAAGGTTTATTGCGACGGGCAGCAAAGATGAAACCATTCAGCTGTATGATATGAAGAAAAGGACCGAACACGGCACTCTTCTGCATCATGATGGTACGATCACTTGTCTGGAGTTTTATGGCAATTCTCACTTATTGAGTGGTGGAGAGGATGGACTCATTTGTATCTGGAAGACGAAGAAGTGGGAGTGCCTGAAATCTATTAAAGCTCACAAAGGTCAGGTGTCATCCCTTTCTGTTCATCCTTCAGGAAAGCTTGCTCTGTCAGTGGGGACAGACAAAACACTCAgaaCATGGAATCTAATAGATGGCAGATCAGCCTtcatcaaaaacataaaacaaaacgCCCACATCGTTATGTGGTCACCAACTGGAGAGAAGTATGTTGTggttataaataataacatggaTATTTACAACCTGGAGACCGCAGCAGTTGCTGGAATAATCTCAAACCCGAAGAGAATCTCTGCAATTCGATTTGTGACTAATTCAATTGTAGCTGTTGCAGGGGATGAAGAAACCGTGAGGCTCTATGATATTGACTCAGAGCAGTGTCTTTGTGAGTTTCGAGCCCATGATAACAGAGTAAAAGCACTGTATAGTTTTGAAGTGGAAGATGTCAGTGTCCTTGTATCAGCATCCAATGATGGATTTATCAAAATGTGGAAGCTTAACATTGAACAGATGCATGGCTCTCCAGCTCTGCTGTGTGAAGTGAACACGGCAGCAAGGCTCACATGTTTGGCTGTGTGGCAACCAAGATCACAGGAAAACCCTTCAAATCCGGGAATGCAAGCTACTTCCTCCCAA

Function

GO: NA

KEGG:

id description
K14830 MAK11, PAK1IP1; protein MAK11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019598 True 882 mRNA 0.44 8 31429321 31432563

Neighbor

gene id symbol gene type direction distance location
AMCG00019592 NA coding downstream 88322 31316662 ~ 31340999 (-)
AMCG00019590 NA coding downstream 139570 31259809 ~ 31289751 (-)
AMCG00019585 NA coding downstream 351040 31072176 ~ 31078281 (-)
AMCG00019584 adcy1,LOC103399855,LOC105011947 coding downstream 449375 30947707 ~ 30979946 (-)
AMCG00019583 LOC103354709,LOC102798054 coding downstream 510147 30908864 ~ 30919174 (-)
AMCG00019596 NA coding upstream 23565 31456128 ~ 31467641 (-)
AMCG00019599 NA coding upstream 89001 31521564 ~ 31529426 (-)
AMCG00019608 NA coding upstream 813269 32245832 ~ 32246580 (-)
AMCG00019606 NA coding upstream 864914 32297477 ~ 32307436 (-)
AMCG00019607 NA coding upstream 884920 32317483 ~ 32325501 (-)
G35397 mak,ick non-coding downstream 18664 31407982 ~ 31410657 (-)
G35304 NA non-coding downstream 391984 31037124 ~ 31037337 (-)
G35243 NA non-coding downstream 754438 30592941 ~ 30674883 (-)
G35214 NA non-coding downstream 908857 30507070 ~ 30520464 (-)
G35190 NA non-coding downstream 986731 30412198 ~ 30442590 (-)
G35448 NA non-coding upstream 314062 31746625 ~ 31746866 (-)
G35458 NA non-coding upstream 639494 32072057 ~ 32072286 (-)
G35471 NA non-coding upstream 749461 32182024 ~ 32183570 (-)
G35481 NA non-coding upstream 852853 32285416 ~ 32285686 (-)
G35484 NA non-coding upstream 864290 32296853 ~ 32297284 (-)
AMCG00019597 NA other downstream 1738 31422029 ~ 31427583 (-)
G35101 NA other downstream 1744019 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 1783358 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 1879159 29535744 ~ 29550162 (-)
G35067 NA other downstream 1907337 29517996 ~ 29521984 (-)
G35476 LOC107575789 other upstream 789501 32222064 ~ 32233398 (-)
AMCG00019645 NA other upstream 3078170 34510733 ~ 34522270 (-)
G35867 NA other upstream 3622456 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 4502233 35934796 ~ 35981536 (-)
AMCG00019698 NA other upstream 6456881 37889444 ~ 38110224 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000082_04928983_04941290 ESCO1, PAK1IP1 coding CI01000082 null 4928389 ~ 4941290 (+)