AMCG00019601


Basic Information

Item Value
gene id AMCG00019601
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 31679378 ~ 31716557 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019601
gCCCTGGCAATGCTTTCGGGCTCACTCCCCTGTGTGAACGCGCAGGACGCGCGCCCGACTGACCGCAGGCAGCGTCACTGTTACCTTGGTGACGTGGTCCAGCCAGGGGATCCAGTTTCAGCTCATCGGCTGCAGAGTAAGCGTGTGCAGGGACTGCTGTCTGGAAGTGGTAACTTTAAGTTTAATTCTGACGCCGTTGATACGAAGTTCCAGCAGAAGGCTCTGAAGCAACCTAAGCAGAAGAAATCCAAGTCGGCTGAATTTCTGATGGcagcagaagaagagagagcagcagcagaaggCATTGAAAACCCTGCTTTTAACATCAGCAGCACAGACCTTTCAGCTTATCAGGCTTCAGAAGAAAGAGAAATTCGACGTGACAGGCAGGATAGCACCCTTGCAGCTCACCAACGAAAAAATGGGCTGCGAGCCCATGCTAAACCAAGAGGAAATGAACGCACCCGAAATTACTTTGACCTACCGTTGGATGAGGAAATCAACCCAAGGCAGTGTGGTACGGAGGTCAGCGCAGAAGATGAGCTGGAATTAAAGATGGTGAGAGAGGATGCACAAGCATTCTATAAGAAGCTGTCAAAGATACTAGAAGACAATGACACTACAGTCATAGATTTACCAGGTGTGGTGATGCCAGAGGATGGGTGGGCCGGTCCATCGGCACAGGGAGGCGATGGAGGGCTTCCTGCTCGCTCAGGCCTGCGGCAGACGGTCGAGGATGAGGTGATCCCTTGTTATGTTGAGCAGTTGAAGGAATGTGTGCAGGCTGACATGATCGCGCTTGGCAGCCTTTCACTGGAACAGGAAGCACACTTAGTGATGCAGAAGGGGCTGTCACTGAGAACAGaacaagaaggaaagaaaagactAATAGCAGAAAGTCAGTTGCTGAAGgcagtgaaaaaacacaaaggtgAAGTGATCGCCAAGTATGGGGAACTGACTGAAGCCAAGACACAATCAAACAGGGAAGGAGGATTTTGGTGGCAGGTCGAGTGGACTAACACCCCACAGCCAGTTGAAATACAGCTAAGATGCCTCCGAGGTGTGAGAGACAAACTGCCTAAAGGACGCTACATGCTCAGTGTCTCCCTGTATAGCCGTCTGGGAGGATATGCACTTCGGTGGTCCCAAATCAAAGACCCCGTTTGGGCTGGAAAAACGTCCCCAGTGGAGCACAGTGGCAACTTATATAACACGGAGCTGCAGTTCATTCAGAGTGTCTTCACTATTTTACCTGCTTCGAGTGATGTCAAACCTGGGATGGTCCTCATGTTTGAGCTGTTTACTGTACCTGGAGAAAATACCCACGTCAGTGAGTTGATTGGCTGGGGTGTCTTCCCTATTTGCGACTGCCAGTTCGAGCCTGTGGAGGGAAAATTTAAAACCCCATTATTGAGAGGCCGCCCGGATCCCACCATCGATCAGTTCCGCAAAATAGAGGATCTCATTTCATCTGACCTGGACAATTGGTTGTGCAACCTTTACTTTCAGATAAAGAAGCTCCCCCGCTGCTATTCCAGGCAAAATGAATATGAGGTCACCCTTCAGATGCCTCCCCAGACTCGCCGGAGCTCAAACAGCTTGTATGCCCGCGAGGAGACTGCAAAGCACCAAAAAAGCTGTGACACCCAGGAGTCTCCTCTGAGGAGATCTCAGTTCAGCCTGTCTGATCACTCCAGGTGCTCTTCAGCGTCACTGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019601 True 1722 mRNA 0.51 12 31679378 31716557

Neighbor

gene id symbol gene type direction distance location
AMCG00019600 tfap2a coding upstream 115085 31553554 ~ 31564293 (+)
AMCG00019595 trnau1ap,LOC105019178,LOC106599269,LOC106569203 coding upstream 227200 31445639 ~ 31452178 (+)
AMCG00019594 mak coding upstream 255863 31413792 ~ 31423515 (+)
AMCG00019593 LOC106536843,LOC107396847,LOC103461601 coding upstream 332288 31339427 ~ 31347090 (+)
AMCG00019591 LOC101268971 coding upstream 367011 31289851 ~ 31312367 (+)
AMCG00019602 NA coding downstream 41528 31758085 ~ 31761946 (+)
AMCG00019603 slc35b3,LOC102782645 coding downstream 357651 32074208 ~ 32086763 (+)
AMCG00019604 NA coding downstream 465522 32182079 ~ 32190986 (+)
AMCG00019613 NA coding downstream 1192445 32909002 ~ 32929192 (+)
AMCG00019615 NA coding downstream 1318214 33034771 ~ 33043805 (+)
G35388 NA non-coding upstream 276119 31399781 ~ 31403259 (+)
G35229 NA non-coding upstream 1110311 30567876 ~ 30569067 (+)
G35166 NA non-coding upstream 1499018 30172410 ~ 30180360 (+)
G35085 NA non-coding upstream 1995942 29635708 ~ 29683436 (+)
G35031 rnf152,LOC103146929 non-coding upstream 2523191 29152700 ~ 29156187 (+)
G35447 NA non-coding downstream 30070 31746627 ~ 31746876 (+)
G35480 NA non-coding downstream 568887 32285444 ~ 32285688 (+)
G35485 NA non-coding downstream 580847 32297404 ~ 32306347 (+)
G35490 NA non-coding downstream 602991 32319548 ~ 32320956 (+)
G35527 NA non-coding downstream 794124 32510681 ~ 32510949 (+)
AMCG00019551 lsm5 other upstream 2374372 29300955 ~ 29305006 (+)
AMCG00019535 NA other upstream 2968491 28613255 ~ 28710887 (+)
AMCG00019496 NA other upstream 7459387 24215877 ~ 24219991 (+)
AMCG00019492 NA other upstream 7592897 24045689 ~ 24086481 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other upstream 7983577 23672125 ~ 23695801 (+)
AMCG00019605 NA other downstream 593480 32310037 ~ 32317571 (+)
AMCG00019609 NA other downstream 607843 32324400 ~ 32392976 (+)
AMCG00019638 LOC107757182 other downstream 2737652 34454209 ~ 34578440 (+)
AMCG00019641 NA other downstream 3123759 34840316 ~ 34851323 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other downstream 4329920 36046477 ~ 36063850 (+)

Expression


Co-expression Network