AMCG00019606


Basic Information

Item Value
gene id AMCG00019606
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 32297477 ~ 32307436 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019606
AAACATCCGTGGGTTTGAACGAAAACACGCTGGGATCAGATCAGTGCGTCTCTCGCACCTCAGCCCCCCATCCCTGCACCCTGGACACGACTGTACGTGACAGTAACAGCGATATCCCAGGCCCAGGAGCAGGAGCTCATTTTGGGGGACAGAAGAAGGGCATCGGGAAGCGGGCAGATCCACGcagcggggagagagagagagacggagggatGGCTTGGCTCAAGTGTCGGTGAGTGGATGCGCTGTTTCGCGGATCGGAGCTGGATCAGGAATcggtggatttaaaaaaaaaaaaaaaaaaaaagaggaaacaaaatagCCACCGTCCACTTCATTCATCCTCTTCTTAACTCCTCCTGCTTAGAGTGAAGCCGGCTGAGATCATGTAGCCAAACCCACTGGCTTGAGAGACAGACCGCGTCCCAGCTGGGGGAGCCTATAAAAACCCAGACACTTGTCCACTGAAGGTATCACAAACTGAGACTTTCCATCCAGCTCTGAACAGCACAGGGATtgcactgcagacacacaggagcACACAAACGCACTAGAGATGGCTCATGATTGGGGATATGGAGCACACAATGGACCATCTACATGGCACCACAGCTTCCCAATTGCTAAAGGACACAGACAGTCCCCTATTGACATCGTGACTGCCCATGCAAGGCACGACGCGAGTCTGAAGCCGCTCTCTCTGCACTACGACCCCAGCACCTGCAATGGGATCCTCAACAACGGACACTCCTTCCAGGTTGTCTTCGCTGATACTACCGACAGCTCAACCTTGAAAGGAGGACCAGTGTCTGGGACTTACAGGCTGTGTCAGTTTCACGTCCACTGGGGCTCCAGTGATGACAAGGGATCAGAGCACACTGTGAATGGAAAGAAATTCGCTGCTGAGCTTCACTTGGTCCATTGGAATGCTGGGAAATACGCAAGCTTTGCAGCTGCGGCGCAGGAACACGATGGCTTGGCGATTGGCAATGAAAATCCCAACCTGAAGGAAATCCTTGATGCTTTTGACGCAATTAAGGAAAAGGGGAGCCAAACCACCTTCTCAAACTTTGACCCCACAACCCTGCTCCCATCCTCTCTGGACTTCTGGACTTACGATGGGTCTCTGACAACCCCACCCCTGCTGGAGAGCGTCACCTGGATTGTCCTCAGAGAGCCAATCAGTGTCAGCTCACAACAGatgGCGAAATTCCGTACTCTTCTGTTTACTGGCGAGGGTGAAGCTCCCCCCTGCTGCATGGTGAACAACTATCGCCCCCCCCAGCATTTGCATGGCAGGAAAGTCCGAGCCTCCTTTAAGTGAGGAAGGAAAGCCATTCCAGGAAAAGCTACTCCACACAAAACTGAACCAAGGCCTTAAAAATAGAAGTGTACCCTACCAATCCAGCCCTTATATAGATGGAAATTAAAGATTGATATATAGTAATAGTTCAGCTGGAACTGCAATAGACATATTCCTATGGCAATCTAAGTACATGTCTCCCATAGACATTTTTGTCAACAATTGCACAGACATCcctataaaatcaatatttttggCCTGCATTTATGCTCGAGAAATTCGTCATGATACTTATGTTGTCCAGGTCTGAGATTATGCAACTGGTGCCAAGTTCTTATAGTGCAATTAAGACCTGCAGAGTTCCACAAGACGACGAAAACAAAGCATCGCCATTTTACAGAAAAATGCAGTAGTGACAGGGAAACATTACAATTGGCTGAAATGAAACATTGCCATCTGCATAGGGGTAGAGATGCACTTTATCTTGTCAATCCGTAATCCCCATCTCCCAGTATCAGGATCACAGCAGCTTAATGAAATGTGACATTCGGTGCAATCATAGCTGATTGAGCCTGAAAGCCCTTCTAGGATCTACTAACGTCCACACATAGAGTCCCGGCTGAGCCCTTTAGGACCTGCATTCCATCAGCGCTTTGTTGATCTGTTGATTTGCACGTATGCTGGAGTGTGTTATATCTGACTATTATTTGTGTTACTAACAGGAATGAAATTGCTGCAGTAGATAAGCATATTTTGCAACATGCTTAACAAGGCTACTTTTTCACTTTGACCTGTTCCATGTACCATTACCACATATAAAAACTGGTCTGTGAGAATTATATTGAATTCAGGTAGCTTCAGTGgatctctctctgtccagcaCAGTTTGAGGGTTTTACAAAGGCAGACTTGCTGAAATATGGATAATAAGCACACAACCATATCAAGAAATCAAGCCTGTTGTTTCAGAGTGTATACTGCAAAGAATCATTGAAGTTCTGTGCATAAAGGGACCATTGAATTCAGGCTTTAGCTTTTAAAGGAATTTGAAGATTATTTGTCGGTCAAATAATGTCTCACTCCTTACTGTAGATAAATTAGTTTTGCTAACCTGTCAGTTGTGGAGATGAAGAAAATttgatcaataaaatatatatatattttatgcttta

Function

GO: NA

KEGG:

id description
K18245 CA2; carbonic anhydrase 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019606 True 2475 mRNA 0.46 7 32297477 32307436

Neighbor

gene id symbol gene type direction distance location
AMCG00019608 NA coding downstream 50897 32245832 ~ 32246580 (-)
AMCG00019599 NA coding downstream 768051 31521564 ~ 31529426 (-)
AMCG00019596 NA coding downstream 829836 31456128 ~ 31467641 (-)
AMCG00019598 NA coding downstream 864914 31429321 ~ 31432563 (-)
AMCG00019592 NA coding downstream 956478 31316662 ~ 31340999 (-)
AMCG00019607 NA coding upstream 10047 32317483 ~ 32325501 (-)
AMCG00019611 NA coding upstream 25020 32332456 ~ 32352846 (-)
AMCG00019610 ralyl,LOC108431401 coding upstream 53173 32360609 ~ 32391262 (-)
AMCG00019612 ralyl,LOC108431401 coding upstream 160847 32468283 ~ 32468546 (-)
AMCG00019617 NA coding upstream 794002 33101438 ~ 33116535 (-)
G35484 NA non-coding downstream 193 32296853 ~ 32297284 (-)
G35481 NA non-coding downstream 11791 32285416 ~ 32285686 (-)
G35471 NA non-coding downstream 113907 32182024 ~ 32183570 (-)
G35458 NA non-coding downstream 225191 32072057 ~ 32072286 (-)
G35448 NA non-coding downstream 550611 31746625 ~ 31746866 (-)
G35516 NA non-coding upstream 22185 32329621 ~ 32330419 (-)
G35526 NA non-coding upstream 175786 32483222 ~ 32496523 (-)
G35537 LOC100846954 non-coding upstream 531397 32838833 ~ 32874693 (-)
G35551 NA non-coding upstream 628602 32936038 ~ 32936337 (-)
G35601 LOC103376870 non-coding upstream 756930 33064366 ~ 33385185 (-)
G35476 LOC107575789 other downstream 64079 32222064 ~ 32233398 (-)
AMCG00019597 NA other downstream 869894 31422029 ~ 31427583 (-)
G35101 NA other downstream 2612175 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 2651514 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 2747315 29535744 ~ 29550162 (-)
AMCG00019645 NA other upstream 2203297 34510733 ~ 34522270 (-)
G35867 NA other upstream 2747583 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 3627360 35934796 ~ 35981536 (-)
AMCG00019698 NA other upstream 5582008 37889444 ~ 38110224 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other upstream 7109451 39416887 ~ 39505562 (-)

Expression


Co-expression Network