Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019615 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 33034771 ~ 33043805 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0003406 | retinal pigment epithelium development | biological_process |
| GO:0032438 | melanosome organization | biological_process |
| GO:0046688 | response to copper ion | biological_process |
| GO:0008057 | eye pigment granule organization | biological_process |
| GO:0070986 | left/right axis specification | biological_process |
| GO:0005813 | centrosome | cellular_component |
| GO:0033179 | proton-transporting V-type ATPase, V0 domain | cellular_component |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019615 | True | 1339 | mRNA | 0.41 | 8 | 33034771 | 33043805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019613 | NA | coding | upstream | 105579 | 32909002 ~ 32929192 (+) |
| AMCG00019604 | NA | coding | upstream | 843785 | 32182079 ~ 32190986 (+) |
| AMCG00019603 | slc35b3,LOC102782645 | coding | upstream | 948008 | 32074208 ~ 32086763 (+) |
| AMCG00019602 | NA | coding | upstream | 1272825 | 31758085 ~ 31761946 (+) |
| AMCG00019601 | NA | coding | upstream | 1318214 | 31679378 ~ 31716557 (+) |
| AMCG00019616 | wwp1 | coding | downstream | 22317 | 33066122 ~ 33095201 (+) |
| AMCG00019614 | cpne3,LOC104924704 | coding | downstream | 74327 | 33118132 ~ 33141895 (+) |
| AMCG00019619 | ripk2,LOC102795164,LOC107577259 | coding | downstream | 629746 | 33673551 ~ 33694225 (+) |
| AMCG00019621 | NA | coding | downstream | 650497 | 33694302 ~ 33705462 (+) |
| AMCG00019620 | NA | coding | downstream | 700731 | 33744536 ~ 33746650 (+) |
| G35553 | NA | non-coding | upstream | 59115 | 32975392 ~ 32975656 (+) |
| G35527 | NA | non-coding | upstream | 523822 | 32510681 ~ 32510949 (+) |
| G35490 | NA | non-coding | upstream | 713815 | 32319548 ~ 32320956 (+) |
| G35485 | NA | non-coding | upstream | 728424 | 32297404 ~ 32306347 (+) |
| G35480 | NA | non-coding | upstream | 749083 | 32285444 ~ 32285688 (+) |
| G35578 | NA | non-coding | downstream | 65195 | 33109000 ~ 33113379 (+) |
| G35595 | LOC103376870 | non-coding | downstream | 340941 | 33384746 ~ 33385185 (+) |
| G35636 | NA | non-coding | downstream | 544578 | 33588383 ~ 33588587 (+) |
| G35658 | NA | non-coding | downstream | 635318 | 33679123 ~ 33724773 (+) |
| G35689 | NA | non-coding | downstream | 720916 | 33764721 ~ 33764947 (+) |
| AMCG00019609 | NA | other | upstream | 641795 | 32324400 ~ 32392976 (+) |
| AMCG00019605 | NA | other | upstream | 717200 | 32310037 ~ 32317571 (+) |
| AMCG00019551 | lsm5 | other | upstream | 3729765 | 29300955 ~ 29305006 (+) |
| AMCG00019535 | NA | other | upstream | 4323884 | 28613255 ~ 28710887 (+) |
| AMCG00019496 | NA | other | upstream | 8814780 | 24215877 ~ 24219991 (+) |
| AMCG00019638 | LOC107757182 | other | downstream | 1410404 | 34454209 ~ 34578440 (+) |
| AMCG00019641 | NA | other | downstream | 1796511 | 34840316 ~ 34851323 (+) |
| AMCG00019662 | hacd1,LOC105890814,LOC106590135,LOC106578705 | other | downstream | 3002672 | 36046477 ~ 36063850 (+) |
| AMCG00019671 | adcyap1,paca,LOC106578701 | other | downstream | 3248541 | 36292346 ~ 36299547 (+) |
| AMCG00019676 | NA | other | downstream | 4134554 | 37178359 ~ 37213519 (+) |
