AMCG00019617


Basic Information

Item Value
gene id AMCG00019617
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 33101438 ~ 33116535 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019617
CCGCGGCTGCTCCTGCGCAGTCCCTCCGAGCAGCTGCGCGGCTGTGCGGACTGTTTGGCTGTGGATGCGGGATCTGCGGACGGCTGCTGCGGCGGAGGTCACGCAGGCGGCTAACCTGGGCAGGTTTGTCTGCGCAGACTCGGCAAAGCAAGCGTGTCAAGCTGCTGTGGAGTGGCGGTGTCGCTCATTCATCTGCTGGCTGTCCGAGCGACATGGCGGGACTGGCTGTGTTACGACCCTCTGTCGGCCGGTGGCTGCACTCCGCGACACGCAGGCGTGTCAAGACCCAGCCGGCCAGGCTGCACTGGACCAGCCGCAGCAAGTCCAGGCCCGGGGAGGGATCTGGTGGTAATGGAGCATTCCTGGTCACTTTACCAGCCTTATCTTTGTTGGGCGTTGAAATTTACAGAAGGAGTAATGACATGGGAGTGGTTCATGCTCATGCCAAAGACGAAGAAGTAATTGAACAAGCCGACTACCTCTACAGCTGTGGGGAAACCGAAAAACTTTACCAGCTCCTAGTCCAGTACAAAGATAGTGACAATGCAGAGTTCCTGTGGCGACTGGCCCGTGCCTCACGAGACCTGGCTTTCCTATCCCACATCTCTGCTGACGATAAGAAAAGACTGATATATGAAGGCTTTAACTATGCAAAGAAGgcactggaaataaaaacatcttgctCTCCTGCGCATAAATGGTATGCTGTATGTCTCAGTGATGTTGGAGACTATGAAGGGACCAAGACAAAAATCGGAaatgcttataaaataaaagaacatttaGAGaaagcAGTTGAACTGAATCCAAAAGATGCTACTTCTCTCCACATCTTAGGCCTCTGGTGTTTTGCCTTCACTGAATTGCCGTGGTATCAGCACAAAATTGCTGCCATGTTGTTTGCATCTCCTCCCACCTCAACGTATGAAGAGGCTCTGGAATTCTTCCTGAAGGCAGAAGCAGTCGATTCTAATTTCTATAGCAAGAATTTGCTGATGGTAGGGAAGACCTATATGATGCTGAAAGATCAGGAGAAAGCCAAGCTGTGGCTCTCAAAAGCCAGGGACTACCCGGCTCACACTGAAGAAGATAAGCAGTTTTTGACCTTTGCCAATTCATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019617 True 1121 mRNA 0.51 10 33101438 33116535

Neighbor

gene id symbol gene type direction distance location
AMCG00019612 ralyl,LOC108431401 coding downstream 632892 32468283 ~ 32468546 (-)
AMCG00019610 ralyl,LOC108431401 coding downstream 710176 32360609 ~ 32391262 (-)
AMCG00019611 NA coding downstream 748592 32332456 ~ 32352846 (-)
AMCG00019607 NA coding downstream 775937 32317483 ~ 32325501 (-)
AMCG00019606 NA coding downstream 794002 32297477 ~ 32307436 (-)
AMCG00019618 NA coding upstream 29286 33145821 ~ 33179133 (-)
AMCG00019625 NA coding upstream 194696 33311231 ~ 33312273 (-)
AMCG00019622 mmp16,LOC108428959 coding upstream 278877 33395412 ~ 33428497 (-)
AMCG00019623 NA coding upstream 595819 33712354 ~ 33716946 (-)
AMCG00019624 NA coding upstream 605876 33722411 ~ 33734363 (-)
G35608 LOC107575789 non-coding downstream 20440 33080431 ~ 33080998 (-)
G35551 NA non-coding downstream 165101 32936038 ~ 32936337 (-)
G35537 LOC100846954 non-coding downstream 226745 32838833 ~ 32874693 (-)
G35526 NA non-coding downstream 604915 32483222 ~ 32496523 (-)
G35516 NA non-coding downstream 771019 32329621 ~ 32330419 (-)
G35637 NA non-coding upstream 471779 33588314 ~ 33588540 (-)
G35652 NA non-coding upstream 546216 33662751 ~ 33663162 (-)
G35656 NA non-coding upstream 553676 33670211 ~ 33670505 (-)
G35690 NA non-coding upstream 663686 33780221 ~ 33780455 (-)
G35735 NA non-coding upstream 880020 33996555 ~ 34063134 (-)
G35476 LOC107575789 other downstream 868040 32222064 ~ 32233398 (-)
AMCG00019597 NA other downstream 1673855 31422029 ~ 31427583 (-)
G35101 NA other downstream 3416136 29679229 ~ 29685302 (-)
AMCG00019554 zgc:56676,eif1b,LOC106578512,LOC105910901,LOC107657782,LOC105027100,LOC107396491 other downstream 3455475 29638566 ~ 29645963 (-)
AMCG00019556 NA other downstream 3551276 29535744 ~ 29550162 (-)
AMCG00019645 NA other upstream 1394198 34510733 ~ 34522270 (-)
G35867 NA other upstream 1938484 35055019 ~ 35055444 (-)
AMCG00019665 NA other upstream 2818261 35934796 ~ 35981536 (-)
AMCG00019698 NA other upstream 4772909 37889444 ~ 38110224 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other upstream 6300352 39416887 ~ 39505562 (-)

Expression


Co-expression Network