AMCG00019621


Basic Information

Item Value
gene id AMCG00019621
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 33694302 ~ 33705462 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019621
ATGGTGCTTCACAAGCCAAGAATGAACAAGCAGCTTTCCAGGATGTCTACCTTGAAGAGCAACCTGTGCTCTGGGGTAGCGTCTTCCTCTGATGACAGTCtgaagggagagggggagaagatgcaaatgaagaaagaaatcaCTCTACTGAATGGCATCTGCCTGATCGTGGGCAACATGATTGGTTCTGGGATATTTGTCTCTCCGAAGGGGGTCCTCATGTACAGCGCCTCCTACGGGATGTCTTTGGTTATTTGGGCCCTAGGGGGTATTTTCTCGGTTTTTGGGGCCCTGTGCTATGCTGAACTTGGCACAACGGTCACCAAATCAGGAGCCAGTTATGCCTACATCCTGGAAGCCTTTGGTGGGTTTCTAGCCTTCCTCAAACTGTGGTCCTCCCTTCTCATCATTGAGCCCACCACACAAGCTGTCATTGCCCTTACTTTTGCCAACTACTTGGTGAAGGCCTTGTTTCCAACCTGCCAGCCTCCGTATGATGCTGTGCGGCTCATTGCAGCTGCCTGCCTATGTATGCTGACTTTCATTAACTGCGCCTATGTAAAATGGGGGACCATGGTGCAGGACATTTTCACATATGCAAAGCTAATAGCCCTCTTCCTGGTCATAACTGTGGGTCTCGTGAAAATAGCCAAAGGAGAAACACAGAACCTTGTGGCTCCATTTGAGGGCTCCTCATGGGAGCCAGGCAACATAGCACTCGCTTTCTACTCTGCTCTGTTCTCCTATTCGGGCTGGGACACCCTCAATTTTGTCACAGAAGAGATCCAGAAACCTGAGAGGAACCTCCCCCTAGCCATCGCTATATCCTTGCCCATCGTGACGATCATCTACCTTCTTACCAATGTGGCTTATTATGTGGTGCTGGACATGCCGTCTATGTTAGCTAGCGATGCTGTTGCTGTGACTTTTGGAAATGAAGCCCTTGGATACGCAAAATGGGTTATTCCAATTGCCGTGGCCATGTCTTGCTATGGAGGGTTAAACGCTTCCATAATCGTAGCCTCCAGGTTATTTTATGTTGGAGCTCGAGAAGGTCAACTTCCTGACTGTTTAAGTCTAATCCATGCAGAGCGATTCACCCCAGTCCCAGCTCTCCTCTTCAATgGGTTTATGGCAGTGGTGTTCCTCTGTGTAGAAGACGTCTTTCTACTCATTAACTTTTACTGCTTCAGCTACTGGTTTTTTGTTGGTCTGTCCGTTGTGGGGCTAATATACCTCCGCATTACTCAGCCAGACAGACCCAGGCCTGTGAAGCTGAGCCTCATCTTCCCTGTGATATACATTCTGTGTAGCCTTTTACTGATAGCAGTCCCTCTGTATGGAGACACCATCAACTCCCTGATAGGAGTTGGGATAGGACTCTCTGGAATCCCTGTCTATTACTTCGGAATTTATCTACCTGTAGAAAAGAGGCCAAAGATCATTCGACGGATAAATGATCTGAATCCTCTCTGCCTTGGAGAGAAGAGGCTGGATGTTGGCAGACACTGC

Function

GO: NA

KEGG:

id description
K13867 SLC7A7; solute carrier family 7 (L-type amino acid transporter), member 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019621 True 1512 mRNA 0.49 10 33694302 33705462

Neighbor

gene id symbol gene type direction distance location
AMCG00019619 ripk2,LOC102795164,LOC107577259 coding upstream 77 33673551 ~ 33694225 (+)
AMCG00019614 cpne3,LOC104924704 coding upstream 552407 33118132 ~ 33141895 (+)
AMCG00019616 wwp1 coding upstream 599101 33066122 ~ 33095201 (+)
AMCG00019615 NA coding upstream 650497 33034771 ~ 33043805 (+)
AMCG00019613 NA coding upstream 765110 32909002 ~ 32929192 (+)
AMCG00019620 NA coding downstream 39074 33744536 ~ 33746650 (+)
AMCG00019626 pter coding downstream 94085 33799547 ~ 33845086 (+)
AMCG00019627 vim coding downstream 349141 34054603 ~ 34063226 (+)
AMCG00019632 NA coding downstream 388265 34093727 ~ 34100512 (+)
AMCG00019635 LOC106590280,LOC105019483 coding downstream 475320 34180782 ~ 34214543 (+)
G35636 NA non-coding upstream 105715 33588383 ~ 33588587 (+)
G35595 LOC103376870 non-coding upstream 309117 33384746 ~ 33385185 (+)
G35578 NA non-coding upstream 580923 33109000 ~ 33113379 (+)
G35553 NA non-coding upstream 718646 32975392 ~ 32975656 (+)
G35527 NA non-coding upstream 1183353 32510681 ~ 32510949 (+)
G35689 NA non-coding downstream 59259 33764721 ~ 33764947 (+)
G35691 NA non-coding downstream 82056 33787518 ~ 33787785 (+)
G35709 NA non-coding downstream 219383 33924845 ~ 33925369 (+)
G35799 NA non-coding downstream 891265 34596727 ~ 34596933 (+)
G35812 NA non-coding downstream 957607 34663069 ~ 34714039 (+)
AMCG00019609 NA other upstream 1301326 32324400 ~ 32392976 (+)
AMCG00019605 NA other upstream 1376731 32310037 ~ 32317571 (+)
AMCG00019551 lsm5 other upstream 4389296 29300955 ~ 29305006 (+)
AMCG00019535 NA other upstream 4983415 28613255 ~ 28710887 (+)
AMCG00019496 NA other upstream 9474311 24215877 ~ 24219991 (+)
AMCG00019638 LOC107757182 other downstream 748747 34454209 ~ 34578440 (+)
AMCG00019641 NA other downstream 1134854 34840316 ~ 34851323 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other downstream 2341015 36046477 ~ 36063850 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other downstream 2586884 36292346 ~ 36299547 (+)
AMCG00019676 NA other downstream 3472897 37178359 ~ 37213519 (+)

Expression


Co-expression Network