AMCG00019626 (pter)


Basic Information

Item Value
gene id AMCG00019626
gene name pter
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 33799547 ~ 33845086 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019626
ATGAAATATGACAGCCGCATCGAGCATCATGACCATAAAAGGTGGAACGCTGCTGGGCTGACCTGCACTGTGTTCCCTCTGCTAGCGGTGTATGGCTGCAGCTACGTGTCTGTGACGTGCTGTGCAGTTGAtcatGTCTTTGCTTTGAGCTACAAGAGGGAAATGTCTGCACTCAGTGGAAAAGTCCAGACAGTGCTGGGTCTCATCGATCCTGCTCAGCTGGGCCGCACTTTGACCCATGAACATCTGACCATGACCTTTGAGTGCAGCTTCTGCCCACTCCCGCCTGGCCAGGAGAATCATGTGGAATCACCCATTGAGATGAAAAACCTTTTCTGGCTGAAGCAGAACCCCTACTGCAGCAAGGAGAACCTGCTGCTCAACCAGGAGACTGAGGCGGTGAAGGAGGAGCTCCTGCTGTTTAAGAAGGCCGGTGGGAGCACGATCGTGGAAAACACCACGACGGGAATCAGCCGAGACGTGAAGACCCTGAAGAGACTTTCTCAGGAGACCGGTGTGAATGTCATCTCAGGGGCTGGCTTTTATGTGGGAGACACCCATTCCAACGAGACCAAGAACATGTCTGTTGAGAAGCTCACAGATATCATCGTCAGCGAGGTTCTTCACGGAGCCGATGGCACCGATATCAAGTGTGGGGTGATCGGAGAAATTGGCTGCTCCTGGCCCCTCCGGGACAGCGAGAAAAAGATACTCCAAGCCACGGCTCACGCCCAGGCCCAGCTGGGCTGCCCTGTGATCATCCACCCAGGACGCAACTCTGGGGCCCCGCCTGAAATTGTCCGAATTCTCCAGGAGGCCGGGGGAGACATCGCCAAAACTGTCATGTCGCACCTCGATAGGACAATATTTGACAACGGAGAACTGCTGGAGTTTGCGAAGCTCGGGAGTTATTTGGAGTATGACCTTTTTGGTGTAGAGATTCTGAATTACCCATTTAATGTTGATGTAGATATGCCGAGTGACAGCCAGAGAGTCAAGAGtGTTGCCCTGCTGGTTGCGGAAGGTTATGAAGACAAAGTAGTCATCGCCCATGATATTCACACTAAAGACAGGTTAACTAAGTATGGTGGTCATGGATTCTcacatatttttagaaatattgTGCCAAAAATGCTCACAAGGGGcattaatcaaaacattgtggataaaattttaattgaaaatccaAAACGCTGGctgacatttaaataagtaaaaacttTGAAGCTGAACAAAGCGTACCATAGGTATTTGGTATCCTtctaaatcataaatcatagtGAGAACAAATATATTGATATGTGTAAAGTAAGGACTGCCTGCCACTGATATCATATTTTGTAGACTATGTTCAgtgcagaacagaaaaaaaatatatatatagcaacaCTTAATCATAATGATCTTGTGGACAAGCCACACATATGCAGAGAGAGGGTTGCAGGTGCATTGTGTCACAACTGCTGATTTGTCAGTCACATAAGATGGATCAATCAAGCATTGCGATATAGATGTCTTTTGACAGTCAGatggaaaacattgtgtaaatcattgatgaataaaataaaattgattgaaTGTAAATTCCGCTGGTCCTGGTTAGACAGAGACATTGAAGTTTAGATGTTTagattgtttaatcatacacctgactatatgcctacaaaatccctgactttgtgcaagtacATCAGTACTTCCATAAGGAAAACACCCACTGAAGACCAGAGATGGCATCCTGAAGAGCTAGTATAAGGGCTGCAGAGCAGAAACCTAGTCTtatcaaacatgaaaaataatgatacgttattgcaaaataaaataattaagcatGCATATAAACTATAATAAGTGAGAATTTTACAGCACTTGCAAAAGTACTCGAGAGTGCAGCAGTGCTTCATTTTGTAGCAGTTAGTCTAAGCTGTTCTGCTTATTTAAATATGGCAATGATACTGGCATCAGGAATCAATAAAGGTGCTTTTACCACTCAATTACTAATGTGTTTCTTGCTAACCATGATGTATGGTATGAATTGTGAAGTACTGTTTCTAAATATCAAGAAATGTTCAATAAAGCAAGTAAACTTATTTTACACTATAAAAATGGTTTGACTATGGTCATGAACATGGCAGTTGCATATtgtcaataaatatatgtttttctggCCTAAAGTTTCGTTAAGTATTTTAGTAAAATACTTGGTTTGGATGGAATCTTTGACTTTGTGTACTGTTGGCATGTTGAGATCCGATGGCAAATTGAAAGACAATGTAAGCATCTCAAGtgagtttgttatttttccaaagaattaaatacttaaaactcaaacaaaaaatgatgtTCCTTTAGTCAGCTGGGACCTGGTGTATGAACTCATTGATGGGTTAAACAGACTGTGTGTGAATGACATACTGCATCCCGATTGTTTAGCATTTCAGATGAAGA

Function

symbol description
pter Predicted to enable hydrolase activity, acting on ester bonds and zinc ion binding activity. Predicted to act upstream of or within catabolic process. Orthologous to human PTER (phosphotriesterase related).

NR:

description
PREDICTED: phosphotriesterase-related protein isoform X1

GO:

id name namespace
GO:0009056 catabolic process biological_process
GO:0016787 hydrolase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K07048 PTER, php; phosphotriesterase-related protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019626 True 2448 mRNA 0.42 7 33799547 33845086

Neighbor

gene id symbol gene type direction distance location
AMCG00019620 NA coding upstream 52897 33744536 ~ 33746650 (+)
AMCG00019621 NA coding upstream 94085 33694302 ~ 33705462 (+)
AMCG00019619 ripk2,LOC102795164,LOC107577259 coding upstream 105322 33673551 ~ 33694225 (+)
AMCG00019614 cpne3,LOC104924704 coding upstream 657652 33118132 ~ 33141895 (+)
AMCG00019616 wwp1 coding upstream 704346 33066122 ~ 33095201 (+)
AMCG00019627 vim coding downstream 209517 34054603 ~ 34063226 (+)
AMCG00019632 NA coding downstream 248641 34093727 ~ 34100512 (+)
AMCG00019635 LOC106590280,LOC105019483 coding downstream 335696 34180782 ~ 34214543 (+)
AMCG00019636 gfod1,si:ch211-276f18.2,LOC108436094 coding downstream 373821 34218907 ~ 34308944 (+)
AMCG00019637 LOC106569208 coding downstream 544127 34389213 ~ 34442804 (+)
G35691 NA non-coding upstream 11762 33787518 ~ 33787785 (+)
G35689 NA non-coding upstream 34600 33764721 ~ 33764947 (+)
G35658 NA non-coding upstream 74774 33679123 ~ 33724773 (+)
G35636 NA non-coding upstream 210960 33588383 ~ 33588587 (+)
G35595 LOC103376870 non-coding upstream 414362 33384746 ~ 33385185 (+)
G35709 NA non-coding downstream 79759 33924845 ~ 33925369 (+)
G35799 NA non-coding downstream 751641 34596727 ~ 34596933 (+)
G35812 NA non-coding downstream 817983 34663069 ~ 34714039 (+)
G35814 NA non-coding downstream 841400 34686486 ~ 34719861 (+)
G35816 NA non-coding downstream 894803 34739889 ~ 34740119 (+)
AMCG00019609 NA other upstream 1406571 32324400 ~ 32392976 (+)
AMCG00019605 NA other upstream 1481976 32310037 ~ 32317571 (+)
AMCG00019551 lsm5 other upstream 4494541 29300955 ~ 29305006 (+)
AMCG00019535 NA other upstream 5088660 28613255 ~ 28710887 (+)
AMCG00019496 NA other upstream 9579556 24215877 ~ 24219991 (+)
AMCG00019638 LOC107757182 other downstream 609123 34454209 ~ 34578440 (+)
AMCG00019641 NA other downstream 995230 34840316 ~ 34851323 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other downstream 2201391 36046477 ~ 36063850 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other downstream 2447260 36292346 ~ 36299547 (+)
AMCG00019676 NA other downstream 3333273 37178359 ~ 37213519 (+)

Expression


Co-expression Network