AMCG00019632


Basic Information

Item Value
gene id AMCG00019632
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 34093727 ~ 34100512 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019632
ATGTACTCACAGCCAGGGTCTGGCGCCCAGCGGGGCTCGAGTCAGCAACGTCTCAACGAGCTCCTCCGGGAAGCGAGACATGAGGCGGGCGACCACTTTCAGCTGCCGGTCAGCCAGGTGGGGCAGGCAGAGTACCCTGACCTTCAGAGGACCAAGCGTGAGCTCGCTCTGCTGCAGGAACTCTACAGCCTGCACGACTCGGTGATGGAGAGTGTCAGCGGGTACTACGACGTACTGTGGAGCGAGCTGGACAACGAAAAGATCAATAACGAACTGCTGGGCTTCCAGAATCGGATTCGCAAACTTCCCAAAGCACTGAAGGAGTGGCAGGCGTTCAATGACCTGAAGACCAAGATCGACGACTTCAGCGAATCCTGGCCTCTGGTGCAGAGGATGGCCAACAAGGACCACAGTCAGGACCAGGGACAGCTCAGCAGCCACATCCACAGGGCAAAAGAGAGGCGCACCTGCCCCAGGGCCAAGCAAGTTAATGCTGCGAACAGAGGCCCGCCCTACAGCGCTACACTACACTCTATTTTCTACACTGCTTCGACGTCAAAGGCCAGGCTGTCCACCCTCTCTGCGTTGCCATCTCTGAACAGCAGCTCGTGCCGGTTCAGCAGGGCGAAGGCCTCCTCCACATGGCCCACGGTCATGTCGATACGGACCTCGGCCTCTCGCACCTCCTTCAGCGCCGCCATGGCCCCCCGCACGTCCTCCAGGTGCTCCACGGGACGGCTCAGCCTCTTGCCCAGGCCGTCGATGAAGCCGTACACTTCCTCCATATCAGCGGAAGCCTTCCCGTTGAGGGCCGCGCCGAACGCACGCTTCCAGTGCCGGCACTCCTGGCTCAACGAGAGTTTCACCGGCTCCACATCCAGCTGCACTGAGCCCACGGTGCTGGTGGCCGGCATCTCGGCGATCTGGGCCTCCAGACActtgagaagagaagagaaatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019632 True 960 mRNA 0.61 7 34093727 34100512

Neighbor

gene id symbol gene type direction distance location
AMCG00019627 vim coding upstream 30501 34054603 ~ 34063226 (+)
AMCG00019626 pter coding upstream 248641 33799547 ~ 33845086 (+)
AMCG00019620 NA coding upstream 347077 33744536 ~ 33746650 (+)
AMCG00019621 NA coding upstream 388265 33694302 ~ 33705462 (+)
AMCG00019619 ripk2,LOC102795164,LOC107577259 coding upstream 399502 33673551 ~ 33694225 (+)
AMCG00019635 LOC106590280,LOC105019483 coding downstream 80270 34180782 ~ 34214543 (+)
AMCG00019636 gfod1,si:ch211-276f18.2,LOC108436094 coding downstream 118395 34218907 ~ 34308944 (+)
AMCG00019637 LOC106569208 coding downstream 288701 34389213 ~ 34442804 (+)
AMCG00019639 tgfbr1,tgfbr1b,LOC108441711,LOC107561948,LOC107100676 coding downstream 527945 34628457 ~ 34650258 (+)
AMCG00019640 lancl2 coding downstream 584535 34685047 ~ 34709923 (+)
G35709 NA non-coding upstream 168358 33924845 ~ 33925369 (+)
G35691 NA non-coding upstream 305942 33787518 ~ 33787785 (+)
G35689 NA non-coding upstream 328780 33764721 ~ 33764947 (+)
G35658 NA non-coding upstream 368954 33679123 ~ 33724773 (+)
G35636 NA non-coding upstream 505140 33588383 ~ 33588587 (+)
G35799 NA non-coding downstream 496215 34596727 ~ 34596933 (+)
G35812 NA non-coding downstream 562557 34663069 ~ 34714039 (+)
G35814 NA non-coding downstream 585974 34686486 ~ 34719861 (+)
G35816 NA non-coding downstream 639377 34739889 ~ 34740119 (+)
G35820 NA non-coding downstream 709147 34809659 ~ 34810041 (+)
AMCG00019609 NA other upstream 1700751 32324400 ~ 32392976 (+)
AMCG00019605 NA other upstream 1776156 32310037 ~ 32317571 (+)
AMCG00019551 lsm5 other upstream 4788721 29300955 ~ 29305006 (+)
AMCG00019535 NA other upstream 5382840 28613255 ~ 28710887 (+)
AMCG00019496 NA other upstream 9873736 24215877 ~ 24219991 (+)
AMCG00019638 LOC107757182 other downstream 353697 34454209 ~ 34578440 (+)
AMCG00019641 NA other downstream 739804 34840316 ~ 34851323 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other downstream 1945965 36046477 ~ 36063850 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other downstream 2191834 36292346 ~ 36299547 (+)
AMCG00019676 NA other downstream 3077847 37178359 ~ 37213519 (+)

Expression


Co-expression Network