AMCG00019656


Basic Information

Item Value
gene id AMCG00019656
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 35477750 ~ 35542868 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019656
CCGAGGCCCTGCACTGGCAGAGAGTTTCAGTGCGTCAGAGGCTCCTGCATCCCTGAGGACAGCGTGTGTGATTTCACTGACCAGTGTGGGGACAGCAGTGACGAGAATGACTGTAAGTACACCGGGGTCtcttctattgGGTTTGAGTTCATCCAAATAAACCTTCACTTTTTACACAGCTCGGCATATGAGAGATGTGACTTTGAGGGGGGTTACTGCAACATGTCACATAGCAAGATCTCACACACAACATGGACCAGAAGAACCGGTTTCACTAATATCGGACCCACTTACGACCATTTGGGGAACCGTACAGcTTATTACTTATCCATTTCCCAGCAAAATGGAGAGCAGCCTTTTGCAGGTCTAAGAAGTGTTGTTTTCCTTCCAACCAACTCCTGTCGGGTCACCTTTTACCAGTACTTCGGGCGTTTGAATGGGGCACTCAGTGTTGTATTGCAAACCCACTACGATGGGCCTTACACAGAAATATGGACTCATAACACACCCCAGAAAGAACAGTGGACCCGTACCTCTGTGACACTTAACAGCACTGAGAACTTTCAgGTGATGATCCAAGGACAGATCTTTAATGTCAGCGAACCCTCAGAAGCACTGGCCATTGACGACGTTTCATTCAGTGAAGGCTGTAGAACTGCTGTGGGATTTCAAACCTGCAACAGCGAATGTATTCCGGAGGTTAAATTTTGCAACTTTATTCATGACTGTCTTCCGGACAAGGCAGATGAAGATCGCTGTCGCCATTATCTTTGGATTGGAGCGAACAATGCTACATTGTCCAGGAGCAGCTTCCTTAACAGCTCAGTGTACCACTCTCCTGGACCGACTTGTGCCTTTCAGTTCCATTATAACATGAAAGGGAGTAATGCACTCGCCGTGTGGCTGAATACAACAGTGGTTTGTTTTGAAGGAACTGTTGTGGACATCGATGGATTCCTGGCTTTGGACGGTTTTCAGTTCTTTAACTGTGGCATCGCAGTGGACACTTCCATGCCATGCCTGCCAGCAATGGTTGCATGTGGAGACGGGACGTGTGTGCCCAGCTCTGCATTGTGCGACTACCACCTGGACTGCTGCGATGACTCGGATGAAGAGACAGAGCTTTGCTGTAGCTGGAATCTGACAATGCTGACTGGATCACGACACAAGGCCAATCCTCCAGCTGCCCAGAATGCCCTGACACAGACCACACTACCAGTACCCTCCATGGTCCGGTTTTGGTATCAGTTGACTGAGGGGGCAGCGATGTTCGTCTTCTCAAGGACTGTATTGGGTGGTGATTTAAGGAGGCTGGTTAGCATTACAGAACCCAACACCAAGACATGGAAGAAGGCAGAAATAGACATAGAACCTTCTACCATGGAAGTGAAAATCCCATTCCAGATTGTGCTTCTTACCAATGGCTCCCTCACTAATGAACATGGAATGACTGTCGACACAAATGGCAGAGTGTTTGTTGGAGAAATAGCCGACAGTGCTGCCTCAGTTTTCATCCTTTCTTCACCCGGTTTATATCAGAACATCACTGACACATACTCCCTGAGGTCCGCACTCAGCAACTCCCTCTATCTTTGCCATTCAATCATGGGGTCCAAGGATGGGGAGGCAGGAGTGTTTGTGGAACAGATTTCAGATAACAATGAAGACAGGATCCGGGCCTCTTTTTGGCTGACAGAAAGTGAATGGTTTCCTGGGTTTGCTGCGCTAGAGTCAGTCAGTCTTCCTGGTCACTATGTTCTCCATGCAGAGCAGAATGTCTCCCTGGCGAAGTATTATGGAACAAACATTTCCACCACAGTGCCACCCCCTCCTCAGTGCCTACCACCTTTATTTCACTGTCCCAGTGGGGAATGCATACCGGAAAACAAAGTGTGCGATTTCACAGTAGACTGCCCCAATGCAGAAGATGAATCTGGGTGTCCTGgaatgtgtgattttgaagaggACTCCTGTGGTTGGTTTGAGTTTGCCCCAGGAGATGGTTTTGATTGGATCAGGAGTTCCCGTGTGGCCGTGCCCCCGGACTACCAGGACCAATCCCCTCCACAGGACCACAGCAACAACACTGCTGAGGgtcattttatgtttgttctGAAAAACAGTAGCAGTATCTCACAGAAGGCCTTACTCAGAAGTCCCAAATACCGCCAGTCTGCTTCTGATCTAATGCCCCAGCACTGGTCTTTCAGGCATTACAATTATGGGGAGGCAGTCGGGGCCGCCGACATGTATTTGCGGATTGACGGTGTGGACAACATCACCGTGGTGTGGAGGACTTTGTACAACAAGGGCAGCCAATGGTTGAAGGAGGTCATTCAAGTTGGCCGACTGACGCAACCCTTCCAGTTCTCGCTGGCAAAGCTCAGCCTGGGCTTTTATGCCGGTGTGTCGGCCATGGATGACATCCTCTTCACAAACTGTTCCCTGCCGCCCCCCGCGGCTCACTGCAAGTCCCCCGATATGTTCCACTGCCGAGAAACCAGGGCCTGCATTGACAGGCTGCTGCTGTGCGACCTTGTGGATGACTGCGGAGACGGATCCGATGAAGAAAACTGCTCTATGGACCTGCAGTGCAACTTTGAGACAGACCTTTGCAACTGGTCTCAGGACACAAGCGATATATTTGACTGGACCCGAATCCAGGGCCCCACATCCACACTAAACACTGGTCCCTGGAAGGACCACACCCTGGGCAATGTGAACGGCCACTATCTCTTCATCGAGGCCTCGTTACCTCAGGAGTTTAAGGACACTGCAGTGCTGCTGAGTCGTAACTTCAGACCCACCACGCAGAATACCAGCAGGCAATGCGTCTTCCGCATCAATTACCACATGTTTGGCGAACACATCTACAAACTGGCTGTGTACAAGAGAACATCTACCAATAGCATAGGAGAGCTACTGTGGGAGCGATATGGGCCACAAGGAAACATGTGGCTAAGACAAGTAATACCTATTACTAGTTTCCTGCCTTTCCAGATTCTGGTGGAAGGCACTGTGGGCGACGATTTCAATGGAGATATTGCAATTGACGATTTGTCCTTCATGGACTGTGTTCCTTATGAAGgTGATTTGCCATCAACGGGCCTGACCACACCCTCAGGAACCCTAAATCCTTCAACCGAGTATCCCCACAGCTGTGCAGAGGGCGAATTTGTGTGCAGTGTGACCGGCGACTGCATCGACCTTGTGAAACGATGTGACTTTAGAGAGGATTGCTATGATAAAACAGATGAAGTAACCTGCGTGCGCCCGaagtgtgattttgaaggctcTAAGATGTATGGCTGGTATCAGAAGCCAGTGTCAAAATTAAGTATCAAAGATGAGTTTAAGTGGATCACTGCACAAGGCTTAACAATCCATCCTGGCGTCCCAAATCACAGACCGAAAACAGATCACACCTTAGGAACTCCTGAAGGCTGGTACTTGTATGCAGACAGTTCGAATGGACAGTTCGGTCAAAGCACTGATCTTCTGACACCTGTCATATCTCAGACTGGGCCAGAGTGCACATTAGTATTCTGGTACCATATGAACGGAGTAACAGTGGGAACGTTGCAGGTTTTCAGTATGTTTGGCAATGTGACTCATGAGCTGTGGTCTCAGAGTGGGAGCCAGGGGGACAGATGGAAAAGAGGAGAAGTGTTTTTAGGGATACGCTTCAATTTccagATTATCCTGAGGGCCAAGCGCGGTGTCAGTTACTTTGGAGATGTCGTGCTGGATGATGTCTCCTTTGAAAACTGTGCCCCTCTCCTGATTCCAGACAGGCCGTGTGAGACGGATGAATACGCATGTGCCAATGCATACTGTATCCCCGAAGACAACCTGTGTGACTTTAAGAATGACTGTGGGGATTCATCTGATGAGGATCCATATATCTGCAAAGCCTTCCACGGACGTTGTGATTTTGAGTTTGACCTGTGCTCTTGGCGCCAGTGGCAAGGAGATGATTTTGACTGGATTATAAAAGCTGGAAGTACCCCAACTCTTGGCACAGGCCCCTCCACAGACCACACACTGAGAGACCCTTCAGGCCACTACATCTACATGGAGGGCTCATTTCCCCAGGCCACGGGGGACTCCACTCGCATCTCCGGCCCAATGATCAGTAGGAGAAGCAAGAACTGTAAGGTTATCTTTTATCTGCACATGGCTGGAGGTGGTGCCGGTCAGCTGAATGTGTTCCAGGTCACGGCGTCGGACAAGTACCTGCTGCTTCTGAATCTCGCTGGAGACCAAGGAAACTACTGGCAAAGAAAGGCGATCCCTCTGCCTGCTGACGAAGACTTCAAGGTGATGTTTGAGGGGAAGGTCGGAGGAGGCAATCGAGGAGATATCGCTCTCGATGACATCACCTTCACGCGAGAATGCCTTCCCTCTTCATCTACTGGCCCTGTAGAACCAACATCTCTCCCTCCAACAGGTACAGatttacatatacacaacaGTACATGCCCTCTCTCTTCTGGGTACAATGACCCTGGACTGGATGAAACTGTTATTGAATTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019656 True 4539 mRNA 0.50 25 35477750 35542868

Neighbor

gene id symbol gene type direction distance location
AMCG00019655 NA coding downstream 59295 35411492 ~ 35418455 (-)
AMCG00019652 LOC103138028 coding downstream 315041 35148458 ~ 35162709 (-)
AMCG00019650 NA coding downstream 395010 35082313 ~ 35082740 (-)
AMCG00019649 NA coding downstream 396733 35066863 ~ 35081017 (-)
AMCG00019647 hecw1,hecw1b,LOC107599276,LOC107656133,LOC107662981 coding downstream 495063 34972810 ~ 34982687 (-)
AMCG00019659 NA coding upstream 58504 35601372 ~ 35602677 (-)
AMCG00019658 NA coding upstream 60515 35603383 ~ 35603789 (-)
AMCG00019657 NA coding upstream 64779 35607647 ~ 35690658 (-)
AMCG00019654 arl5b,LOC107591025,LOC103373092,LOC107723111,LOC107690731,LOC103034648 coding upstream 153571 35696439 ~ 35714734 (-)
AMCG00019661 NA coding upstream 199999 35742867 ~ 35763241 (-)
G35810 NA non-coding downstream 826763 34650702 ~ 34650987 (-)
G35803 NA non-coding downstream 827519 34645135 ~ 34650231 (-)
G35792 NA non-coding downstream 899278 34506033 ~ 34578472 (-)
G35735 NA non-coding downstream 1414616 33996555 ~ 34063134 (-)
G35690 NA non-coding downstream 1697295 33780221 ~ 33780455 (-)
G36016 NA non-coding upstream 511611 36054479 ~ 36061297 (-)
G36038 NA non-coding upstream 625098 36167966 ~ 36168171 (-)
G36074 NA non-coding upstream 856544 36399412 ~ 36399659 (-)
G36080 NA non-coding upstream 994819 36537687 ~ 36537903 (-)
G36082 NA non-coding upstream 1024061 36566929 ~ 36567264 (-)
G35867 NA other downstream 422306 35055019 ~ 35055444 (-)
AMCG00019645 NA other downstream 955480 34510733 ~ 34522270 (-)
G35476 LOC107575789 other downstream 3244352 32222064 ~ 32233398 (-)
AMCG00019597 NA other downstream 4050167 31422029 ~ 31427583 (-)
G35101 NA other downstream 5792448 29679229 ~ 29685302 (-)
AMCG00019665 NA other upstream 391928 35934796 ~ 35981536 (-)
AMCG00019698 NA other upstream 2346576 37889444 ~ 38110224 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other upstream 3874019 39416887 ~ 39505562 (-)
AMCG00019731 NA other upstream 4427307 39970175 ~ 40123987 (-)
AMCG00019741 NA other upstream 6528194 42071062 ~ 42078932 (-)

Expression


Co-expression Network