AMCG00019681


Basic Information

Item Value
gene id AMCG00019681
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 37372379 ~ 37378679 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019681
ATGCAATCGCACGCCTGCGCCCTGGTCCGCCCTTCTCCGTCAGCCGTCCTGCCTGAACCCGGAAGTAAATACTGGTCTTGTAACCACGTTTTGCTTCCTCTGGCGCCGGTCTTGCAGCCTCCAGAAAAGGTTCAGAAGTTGTCAATTAATCTTCCACAATGCTATGGCTTTCAAGTTTCTGCAAAGATTTCGGAGTTGGAATTTAACAGTGAAACCATTATGCTTCCCGACCAGTGTGGCATATCTCTCACGGCACACTGGCACCCATGGGAAGgtgctgtgcccagtgtgccTCTGGACGAGATCCAGTCGCTGCATGTTAAGACAGGGATGCCAGAGATATCGTTATGACTGTCAAAGCATGAGCCTGTCAACCACCTGGGATCCTCTGTATCTCACAGGAGGTTCTGTCTGTCTCCACGCAGATGCTTCTGACAGGTTTAGGCTCACTAACCAGCAGTCCGCAACACTGGACGATGAGGGCTTTGTAGAACAGCTCGGACACTGCTCTTCCTCCAGGCATGTTTTCAAACTCCTCCTTTCCTTACAAACCATGTCTGACATGATGGCTGCCTCAGCTCTACAGAGGATTGCCGAGCTGGAGCGTGATGCAAATGCGTTGAAGGACCCAGCTGTTCTGGACCATGATGTTTTGAAAGCCCTCTGTTTCCAGTTTGAACAGGACTCTAAGAGGTTAACGGATACAGGCCTGGTGCGTGCCCTTCATGCCTGTACGCAGCTGTTGGTCGACCCCTGGAGCACACTTATGATACGCCTGGTTTCTGAGAGCCAGGAGCGTCTGGATAGGGGGGCCATGGCAATCAAAGACCTCTGTGTTTTGGCACAAGCACTTTTAGCCCTGGAGGGGCCCGACTGTGCAATGTTGAAGCCAGTCATAGAGCAGATACAGGGACACAAGATGACGGAGTGGAGCTTGGAGAATTTGACACAGGTATACAGCATGCTGCAAGCAGGAGTTGGGGTAGGAGGCCGCTACCagaatctcctgaactccatgAACACCTATACCATCTCTGTAGCCTCCAGTCTGAGTCCTTCCTCTATCAGCCAGATACTGAACTCATTGGTCGTTCTGAACCAAACCCAGGCCATTCCCTTGGTCATAATGTTGTGCAAGCACACAGTGAAGCATGTGTCCCGGTTTTCAGATGGAGAGTTGGTGCACGTGCTGGAGGCTTTAATGCACTTTGGCCACAGCGACCAGTACTTTGTGGATGCTTTGGAAAAGCATGTCCCCAAGAACACCTTCACCATGGAAGCAGAGGCTGTGACCAAAGTCCTGCAGTACTGCGGCCGCAGGTTGATTCTCTCCAAGGCCATCTTTGATGCCGTGGCGGAGAGCTTCGTATACAGAGCGGACTCTTACAGCACCAGCCAGATCGCCAGGCAGATCATGCCCTTCGGGAAGCTGGGGTACCTGCCACCAAATGCGGGAGAGCTGTTCTGCAAGGTGGAGGGGATCCTCCAGACCCGCTTCTCTCAGTTTCAGCCCCGCACTCTGCTTAACCTGCTGCACTGCTGCACTCTCATTGAAAGGTTCCCTGTGAATTTTGTGGCTAAAGTTTTTAATCCCTATTTCCTTCAGCAGTTAGAAGcatGGGGTAATGGCTTAGACAAGATCCTTTTGTCACAGCTGACACAGCTCTTTATGACTGTGAAACTTGAGTGTCCATTTTACAAGggtCCCAACCTCCTTCCCAAATACCGTGTGAAATCTTTCCTGACCCCTGGCCGATCCCTGGAAACTCCTGTGGACATTCTTCTTTACAACCGGGTCAAGGCGGGCCTGATCGACCTGCTTGGAGCTCGAGCTTACTTTGCATCCCGTGTGTTGACCCCGTACTGCTATACTTTAGATGTGGAGATCAAGCTAGATGAAGAAGGATATGTGTTGCCAGCCAGCCATCATGAGATCATCTACAGGAGGATAGCACTCTGCATCGATGGCCATAAGAGATTCTGTGCCAATACGCATCACCTCTTGGGAAAAGAAGTCATAAAGCAGCGGCATCTGAAACTGCTGGGTTACGATGTTGTGCAGataCCATTCTATGACTTTGATAAGCTGTGGGATCGTGCAGAAATAGTGGAATACCTTCATAAGAAGATCTTCCCCCACAGCTACCGACTCAGCTGGTGACACTACGGGAATTAATCACTGGTTCGGAGTGGAAAGGAACGGGTTCTAGAAAAGTAGCTTTGCCACTGCCACGATATATCCAATAATATATCCAGTGTCATTGGGTATAGATTCAGATGTTCAGAACTTCACTTTATTTACACCAAAACTATTAACTGACTTATGAACCCAGATGAATGAGCCTGTGATACACATTGTCTCACTGATtcaagtaatacaaaaaaatgtccattgaaagaaattaaaatatttgtctgGTTTCTGAACAGTGTCAACCCCACATGTCACTGTGTCACATGTGCTTCCTCTCTATCTATTACACAGTTTTCTATAAACACAATTAGCTTTGGGTTTGAACAAATATGGTCCTGTTGAGTTCAATACTTatcttttccagttatttcttACATCTTGAGAGCAGCAGGATCTTAAATAAGTCAAGTTCAAATTTTGTTTGTCTATGGAATCTAAAACACTGAGGTCCACCATAccataaattaagttaaatatgaCTAGAAAGTCTGAACTGCAAAATCCCACAATCTCTTAGGCTACATATTTACCTGATGCTTCATTTGGATGCTAATTACACATCTTCAAATATTATTCTACCTAGTGAAGCAGATTTGTTGTCTGGGTTCTCTGTACTGCCTGGACAGTATGAGATATATCTcagcttaaatacattttcattatttatgttcTGCACAGCTGATTTTAGCACATACAGTTATTTGGGAAACAGCCTGTTCTGTTAGCAATGCCTCATTTTGATCTAGGGTAATATGCCATATCCCAAACCATCCACCTGACATGGAAACATTTCAGGaatccttttaattaaaataccacaCAAGGAGATCAGCGCAAATACAGGAAAGAAGAGTGTTTGGAGTACAGTTTctgatgaaaacaatacaacatgATTACTTCATTTAGCTGTTCCAATCTCTGAAGATCTGAAgttttaag

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019681 True 3133 mRNA 0.46 7 37372379 37378679

Neighbor

gene id symbol gene type direction distance location
AMCG00019680 myl12.2,LOC104925296,LOC105894777,LOC107732590,LOC103037289,LOC107746904 coding upstream 1123 37365974 ~ 37371256 (+)
AMCG00019677 NA coding upstream 203092 37091023 ~ 37169287 (+)
AMCG00019670 tyms coding upstream 1171188 36197051 ~ 36201191 (+)
AMCG00019669 NA coding upstream 1181583 36187052 ~ 36190796 (+)
AMCG00019660 NA coding upstream 1640121 35716345 ~ 35732258 (+)
AMCG00019689 NA coding downstream 20921 37399600 ~ 37406431 (+)
AMCG00019691 NA coding downstream 31089 37409768 ~ 37419547 (+)
AMCG00019693 NA coding downstream 225834 37604513 ~ 37606380 (+)
AMCG00019695 NA coding downstream 227781 37606460 ~ 37607720 (+)
AMCG00019694 NA coding downstream 229396 37608075 ~ 37619035 (+)
G36130 NA non-coding upstream 131885 37238889 ~ 37240494 (+)
G36106 NA non-coding upstream 311735 37060418 ~ 37060644 (+)
G36098 NA non-coding upstream 425881 36946101 ~ 36946498 (+)
G36094 NA non-coding upstream 460400 36911541 ~ 36911979 (+)
G36088 NA non-coding upstream 744309 36627690 ~ 36628070 (+)
G36189 NA non-coding downstream 9649 37388328 ~ 37389962 (+)
G36370 NA non-coding downstream 1477160 38855839 ~ 38857856 (+)
G36454 NA non-coding downstream 1703431 39082110 ~ 39082411 (+)
G36464 LOC103376870 non-coding downstream 1879352 39258031 ~ 39258546 (+)
G36497 NA non-coding downstream 2013813 39392492 ~ 39430557 (+)
AMCG00019676 NA other upstream 158860 37178359 ~ 37213519 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other upstream 1072832 36292346 ~ 36299547 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other upstream 1308529 36046477 ~ 36063850 (+)
AMCG00019641 NA other upstream 2521056 34840316 ~ 34851323 (+)
AMCG00019638 LOC107757182 other upstream 2793939 34454209 ~ 34578440 (+)
G36212 NA other downstream 135308 37513987 ~ 37516027 (+)
AMCG00019708 vps41,LOC102790284 other downstream 1199637 38578316 ~ 38632178 (+)
AMCG00019747 tubb6,LOC108431516,LOC100711323,LOC107688430 other downstream 5177861 42556540 ~ 42572080 (+)
AMCG00019751 NA other downstream 5246051 42624730 ~ 42627105 (+)
AMCG00019755 NA other downstream 5581977 42960656 ~ 42962658 (+)

Expression


Co-expression Network