AMCG00019682


Basic Information

Item Value
gene id AMCG00019682
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 37238889 ~ 37309104 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019682
CGGGACTGGGGCGCTGACATTCCACTGACTCCCAGCATTATTTTTGTTCGGTGGATCGCAGTGCAGTCCACAGCCCTGCACCTAGTCGCCGCTTTGCCTGGATTCACAATTGTTCACTTTTTTTGGAGTTTTATTCCTCTTTCTGCCTTCTCACCAACCGATAACATTTTAGCTTTGAGCTTGGCACTGAAGTAGAAACTACAAAGACTCGGACTAAAGACCACGTTTGGAGCCGCTCAGGATGTCCTCAGGGTCCTTACCTTTCTACCAGAAACATCACCGGCACTATGATCGTGGGTACCGCAGCACGGGGGTGTCGTCCGCCCTCAGCCACTACCACGAAGAGAAGAGCAGCTTGTCAACCAGCAGCACAggGTTGAAAGCTTCCCAGTATTCAGGTGGGGCGCTGCAGGAGAGCAAACTAAGCCCACGACCCAAGAGAGCCAAACCCACCTACCTGGCTGTGGACAAAGACAATGAGATCATCGGCTATGTTGTGCCAGTCTTCAGAGGCCAGCGAGAATTTCACAGCGGAATAACTGacacagaggaggagaggaTCAAGGAGACAGCTGGTTATCTGGCTAGAAGGAATCTCTTTGCTGCAGAAGAAGGTATCAGTCTGATGGCCACCAGCCAGTCCCAGACAATGGAAGTTGGAAGGATTGAGAAGAAGTCAAGAAAGGTTGCTATGAGAGAGTCTGCGGAGCACATCACCttaaacaaaaagatccATGAGAAGGAAGAGTTCCACAAGAAGCTGAATGAAGACAGTCTTATGCATGCCCCTGAGTTTGTCATTAAGCCACGATCCCACACGGTGTGGGAGAAACAGAATGtgaaactgcactgcactgtgtccGGCTGGCCTGAACCAAGAGTCACTTGgtacaaaaataatgttgcCATTGATCTCCATACCCATACTGGAAAGTATAAGATAGAGAGCAGGTACAGCGTCCACTCTCTGGAGATCAACAGatGTGATTTTGATGACACAGCACAGTATCGTGTTTCTGCAATGAATGCAAAAGGAGAGCTATCTGCCTACGCTTCGGTAGTGGTGAAAAgatacAAAGGAGAGATAGATGATTCTCTTCCCACTCCCAGGGCTCCATCATATGACCTCTCCTCTGGGTATGGCACAAGGTTTGAAGTCCACATTGTCGACAAGTTTGCAGTGTCATtcggcagagagggagagacaatGAGCCTGGGCTGTACCGTGATCGTTTACCCCAGTATCAAACGCATCCAGCCTGAGATTCAGTGGTACAGAGATGATGTTCTTCTTCATCCCTCCAAATGGGTGCAGATGCACTGGAGTGGGGAGCGGGCCACtctgacactcacacacctcAACAAGGAGGATGAGGGACTGTACACAATGCGTGTGATCACCAAGTCAGGCTATGAAACCTACGCTGCATACGTGTTTGTTCAAGACGCGGATGCCGAGGTCGAGGGGGCTCCGGCTGCTCCCCTGGATGTCGAATGCCAGGATGCCAACAAGGATTATGTCATTGTCACCTGGAAGCAGCCTGCTGTGGACGGGGGCAGCCACGTCCTGGGATACTTTGTCGACAGGTGTGAGGTGGGCACCACTCACTGGAGCCAGTGCAATGACACGCCTGTCAAATTTGCCCGCTTCCCTGTGACCGGCCTGGTGGAGGGCCGTTCCTACGTGTTCCGAGTGCGGGCCGTGAACAAGTCCGGGATCAGCAGGCCCTCCAGGGTGTCTGAGCCTGTGGCAGCACTGGACCCCGCCGACAAGGCAAGAATGAGAGGTCACCCTTCAGCACCTTGGACTGGGCAGATTATTGTGACTGAAGAGGAGCCTGCagAGGGTGTGGTGCCAGGAAAACCCTCTGAGTTGGCCGTTACTGAGGCCACAAAGAACTACGTTGTTCTGAGCTGGAAGCCACCTGGTCAGAGAGGCCATGAGGGTATTATGTACTATGTAGAAAAGTGTGTAGCAGGCACAGATAGCTGGCAGAGAGTAAACACTGAGATTCCTGTGAAGTCTCCACGCTTTGCTCTCTTCGACCTGGCTGAGGGCAAGTCCTACTGCTTCCGTGTCCGCTGCTGCAATTCGGCAGGCGTGGGAGAACCGTCCGAACCCACCGAGGCCACCGTTGTGGGGGACAAGCTGGACATCCCCTCGCCTCCGGGCCGTGTTCTGCCAACAAGGAACACTGACACATCTGTGGTGGTTTCCTGGGAGGAATCAAAGAATGCCAAGGAGTTGGTGGGGTACTACATTGAAGCGTCCATCGTGGGGTCTGGTGTGTGGGAGCCGTGCAACAACAAGCCAGTGAAATGCAAGAGGTTTGTGTGCCACGGCCTTACCACTGGACAGACATATGTGTtaagagtgagagcagtgaACGCAGCTGGACTCAGTGAATTCTCCCAGGAGTCTGAGGCCATTGTGGTCAAGGCTGCCATTGCTTCACCGGCGCCTCCCTGCGAAATCACTGTGCTTGAGTGTGTGCGCAGCTCCATGGTGCTTGGCTGGAAGCAACCAATGTTCATCGGTGGAGCCGATATCATTGGCTACTTTGTGGACTACCGTGAAGTTGTGGATGGTGTGCCAGGGAAGTGGCATGAGGCGAACATAAAGGCTGTCAGTGAAAGGGCATACAGGGTAAATGACCTGAAGGAGAACAGGCTGTACCAGTTCCAGGTGCGAGCTGCGAACCTGGCTGGAGTTGGCATTCCCTCCATGCCCAGCAATATCTTCAAGTGTGAGGAATGGACCATTGCTGTGCCAGGACCTCCCTATGACCTGAGGATCTCTGAGGTGCGTAAAAATTCAATGGTACTGCTGTGGAACCCGCCCGTCTACCAGGGCCGCAGCGAGGTCAATGGATTCTACGTGGACATCAAAGAAGTCGATGCTGATGAGGATCAATGGTGTGGCGTCAATCAGAAGGCGACCGACAAGAAATACATGAAAATTAAGGACCTAAAGGAGGGCACTTCTTACGTGTTCCGTGTGAGGGCACAGAACAGGGCTGGGGTGGGAAAGCCCTCAAACATGACTGATCCAATCCTTGCTGAGACTCGTCCAGGTACCAAGGAGCTGGTTGTGGATGTCGATGACGATGGCGTGATTTCATTGATTTTTGAGTGTTCTGAGATGACCCCTGATTCTCAATTTGTGTGGTCCAAGAATTATGAAGAAATTTCAGATTCATCTCGCCTTACTATGGAGACCAAAGGTGGCAGATCAAGAGCTGTCTTTAATGATCCATCAATTGAAGACCTGGGCATTTACTCTTCTGTTGTCACAAACACAGATGGTGTTTCTGCCAGCTATACTTTAGATGAAGAAGAACTGAAACGCCTGCTGGAGGTCAGCCACGATCATAAGTTCCCCACTATTCCCCTGAAGTCAGAGCTGGCGGTCGAGCTGCTGGAGAAAGGTCGTGTCCGTTTCTGGCTGCAAGCCGAGAAAATGTCTGCCAACGGCAAGGCTAACTACGTCTTTAATGACGCCATGCTCTCCCAGGGAGAGaaatataaaatgaactTTGACAAAAACACTGGTATTGTGGAGTTGTTTATGGAGAAACtggaagatgaagatgaaggcaCATTTACTTTCCAGCTTCAGGATGGAAAAGCTACCAATCAATCCAGCTTGGTTCTGATTGGAGAAGttttcaggaGTCTACAGAAGGAATCAGAATTCCAGAGACAAGAATGGTTCAGAAAACAAGGTCCTCATTTTGCGGAATATCTCAGCTGGGAAGTCACTCCAGAATGCAACGTGGCTAATATTCTGAAGGAGACTACCATCGTCTGGTATAAGGATGAGAGAGAAATCATGGTGGATAACAAACATGATTTCAAGGAAGGAGTTTGTACTCTCCTGATCTCCCAGATTTCAAAGAAAGATGCAGGTGTTTATGAAGTGATTCTGAGGGATGACAGAGGAAAGGATAAAAGTTTGTTGAACTTGACTGATCAAGgtTTCAAAGACTTGATGAATGATGTATTCAGAGTGATTGCGGGGTCTGCCACAGAGCTGAAGATCATGAGCACAGAGGAGGGCATCAGGCTGTACTCCTTCATCGCCTACTACACTGAGGAGCTCAGAGTCGGCTGGTTTCACAAAGAGTCTAAGATTTCCTTCACAGACAGAGTCAAGAGTGGTGTGACAGGAGAGCAGCTGTGGCTCCAGATCAATGAGCCAACGGAGAAGGATAAGGGCAAATATGCCATTGAAATCTTCGATGGCAAGACTGGTGTCCGGAAAACAGTCGACCTTTCAGGACAGGCATTTGACGATGCGTTTGCGGAGTTCCAGAGGCTGAAGCAAGCTGCAATTGCAGAAAGAAacCGTGCTCGAGTTATTGGTGGTCTGCCTGATGTGGTGACAATCCAGGAGGGAAAGTCCCTCAACCTGACTTGCAACATCTGGGGAGACCCTGTCCCAGAGGTGACCTGGCTGAAGAACGAACGGGAGATGGTGTCAGACAAGAACTACCTCCTCAAGTTCGAGTCGGGCAAGTTCGCCAGCTTCACCATCTCCTCCGTCAGTTCCGTGGACTCTGGGAAATACAGCATTCTGGTGAAAAACAAGTATGGCACGGAGAGTGGAGACTTCACCTTAATTGTCACCCCGGGTACTGGAAATCTGAGCAGCGCTATACATGTGACTGATTGTGCCGGCAATGTTGTGGAAACCATGACTCCTGGCAGCAAGATGAAACCTGTCAGTGGCagaaaaagggagaaaagaaaagATTCTGTGGAAGTAAAGCCTTGTGTGGTTGAAATTGTGACAACAGAGGAGACCCCAGAACAGAAAGAGCAGCCGTCAGGGCATGAAAAGGAAGAGGTGGAGCCACATGGCCCCACTGACAAGCAAGTATTAGAGCCAAGGGACCAACAGACACGGGAAGACAAGCCACAGCCAAATAAGCCAGCGGAAGAAGAACCTGTGCAAAAGCAATGAATGCATATGAAACAGAAAgtatgttttgaaagtgattCAGGATGTTGGATTATATTAATGCAATTGTATTTAGTAATGTTTTACTGTAAGTGGCTGATTAAGATTAATTCATGTTTCACAGGGGAAATAATACGAATAAATGTAGAGTATCTCTTACATACACACTAACTTCATACGTATTGAATATCAATTGAATAGTTACACCATTTATGATAACATTACAGGTACTTATTAAAAAGTGTTACCATTGActttttatcaaaataatatgaatttagtgaattattattattatttttccatttcaaagtgtgcatgtgtgcagtgCTGAATTTCAATATTGGAAGAGGGTATACACTTTAAATCAATTTTGATTTGTGCCTTATACATACTGGTATTTCAATAgcatttaacttaaataacattaaataaaacaattggtATTTTACCTTTATTGTATATTCTGTTATATTCTGCAAGTTCAcacttataaatatatatatatatatatatatatatatactatctTATCATAACATATTACTAAATTTCCAGAACCACATATAGTTAAACTGATTTATGCGTTATATTAGAACtcttatatgtaaaaaaacaaaaaacaaaacaatgatccAATCTATACTTTTACTTTCAGTTTTACTTTGCTAGTAtaacacacatttcagagaaaCATTAACCACAGCTTAAAAACATTGCACAAAATGTGTGAACTAAGGTAATATCCTCTTTTACAGAATCAttgaaaataactttaaattacTGCATAACTATACCTCTATGCATTCTATGTATTGTAATGAAACTTTATGGGCTGTTTTCCTAGACTCAGATTAACACAAATCTTAGAACACCCAATATTCTCTTACATAGGTTTATCCAAGACAAAAGCTAATCGAGGTCTTTGAAATCAGCTGTAAGCACTGGTTCCACAGACCAAAATTAGCACTATTCATGGACTACCCAATGCTATTTTAACCAGAGTAGCCCTTATAGTGTAATAATTGAGGTCTTTGAAAAAAAGGTATGCTTTTTAAAGGTGAATTATTATTGACTTAATCCACCTAgttaaaaactaatttcttaGTAACTGCTAAcaggctggtttcacagatcaGAAAGGTAGGGTTTTAGGTAGGATAATACAAGACTAGTACTAATCAGGGTCTGTGAAACCTGCAGAACATGTCTGCCACTAATACATGTATCTTTAAATCTTCTGCTATAGACATGGATATAGACAAGGTGGCCATTTGTTCATTCAATTGTAAGAACtataaaaaaacagtataaCAATAATTGTAGATCACAAACCTTTAAGAATGGCtgatttgtatgatttattgtaattgttcaaTGTATACCCAAAATATGTGTGAATTAAATACTACATTATTCTCTGCTGTCATGATCTACCATATTATTTAATAAGCATAATCATCAAATGTTCATGGACAAGATACTTGGAGATCCCAATTCTTACAAACTACAAGGAACTTAAGACACTAAATATTATATAACTAAATTCTATTCCCTTGTTTTGTAGGTGAATTATTCTACTTGAGCTTTgactaaataaaaccacaaataaatccacattaaaatcacattacCTGATGGCAGATTTTATTTAGacataatgaaaaatacttGGTTTAACAGGGTGCCTTATGAGATTGGAATCGAATACAAAGTTAGCAGCTGCATTTAGATTTTGAGGAACAAAGTTGCTAAGATAAGCACCGCCCCCGGACACCCACCTTTCATGGCATTGAACTGTATTGTCATCAACAAAATAGAccatgaaatgcaaatattgtgatattgatttacattacatttaacatttctaaaaataaatataaagtttcCCAGCAAtacataacaaaattaaaagtatatcCAGGGCTGAAGCTTTTAACATTTTGCTTACTTATCGATCACCAGTCTCACGTCCTGCCAATATAATGTGTGTCATAATGATGTGATTTCACCAGCAGCAAGTTTCGGACAGCAGCTGTGTTTATATACTAGTAAATGAATCATGAGTAGAGGTACTCTTATAATCTAGCCTTACCACCTTAAACAAGTCAAGTCTACTAAAAAACTGTCAATACAAAAattgttaataaaaatgttattaaaaaaaa

Function

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019682 True 7134 mRNA 0.44 39 37238889 37309104

Neighbor

gene id symbol gene type direction distance location
AMCG00019679 NA coding downstream 18461 37198256 ~ 37220428 (-)
AMCG00019678 NA coding downstream 148926 37072418 ~ 37089963 (-)
AMCG00019675 NA coding downstream 496507 36715937 ~ 36742382 (-)
AMCG00019674 NA coding downstream 523153 36645367 ~ 36715736 (-)
AMCG00019672 NA coding downstream 998508 36217304 ~ 36240381 (-)
AMCG00019685 LOC106593846 coding upstream 69618 37378722 ~ 37384501 (-)
AMCG00019687 chmp5,LOC106590149,LOC106578693 coding upstream 82202 37391306 ~ 37398627 (-)
AMCG00019683 NA coding upstream 112312 37421416 ~ 37425118 (-)
AMCG00019686 NA coding upstream 148989 37458093 ~ 37489142 (-)
AMCG00019688 NA coding upstream 182132 37491236 ~ 37492869 (-)
G36160 NA non-coding downstream 52733 37167433 ~ 37186156 (-)
G36097 NA non-coding downstream 317083 36921583 ~ 36921806 (-)
G36095 NA non-coding downstream 326910 36911626 ~ 36911979 (-)
G36093 NA non-coding downstream 479538 36759030 ~ 36759351 (-)
G36082 NA non-coding downstream 671625 36566929 ~ 36567264 (-)
G36172 NA non-coding upstream 16694 37325798 ~ 37326994 (-)
G36184 NA non-coding upstream 60002 37369106 ~ 37372128 (-)
G36267 NA non-coding upstream 429171 37738275 ~ 37740601 (-)
G36284 NA non-coding upstream 664349 37973453 ~ 37973683 (-)
G36312 NA non-coding upstream 809616 38118720 ~ 38118934 (-)
AMCG00019665 NA other downstream 1257353 35934796 ~ 35981536 (-)
G35867 NA other downstream 2183445 35055019 ~ 35055444 (-)
AMCG00019645 NA other downstream 2716619 34510733 ~ 34522270 (-)
G35476 LOC107575789 other downstream 5005491 32222064 ~ 32233398 (-)
AMCG00019597 NA other downstream 5811306 31422029 ~ 31427583 (-)
AMCG00019698 NA other upstream 580340 37889444 ~ 38110224 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other upstream 2107783 39416887 ~ 39505562 (-)
AMCG00019731 NA other upstream 2661071 39970175 ~ 40123987 (-)
AMCG00019741 NA other upstream 4761958 42071062 ~ 42078932 (-)
G36817 NA other upstream 5235012 42544116 ~ 42544524 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000043_00449493_00494730 MYOM1B, MYOM1 coding CI01000043 null 449493 ~ 494730 (+)