AMCG00019685 (LOC106593846)


Basic Information

Item Value
gene id AMCG00019685
gene name LOC106593846
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 37378722 ~ 37384501 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019685
CTCTGCCTGCCGTACTGCCGTAACACAAAATGATTCGCCCCTCATAAAGATGGCAGCAAGTTTCCTGTGTGTTCAGGAAGTATCTCAACGTCTGTGTTTACCTAAGCACTGAAGACATGGCCGGGAATACAGTAACTGTGACGGTTGCATatgGCACCGCCAAGCACAGTGTGGAAGTCGCAGGGGTGGAGGGAGACGAGCCGGTTTTAAAGGATTTGGCGGAGGCGCTTGCCCAGCTGACGGGGGTTCCCATCCCCTCTcagaaaatcattttcaaagGAAAGTCTTTAAGGGAGATGGATCAACTCTTGTCAAGCTTTGGGATAAAGCAGGGGTGTAAACTCATGATGATCGGGAAAAGGAACAGTCCAGAGGAAGAGCTGGAACTGAAGAAGCTGAAAGATATTGAGAAATCCATAGAACAAACTGCTAAGAAACTGGAAAAGGTGGACGGGGAACTGACTGGCTTAAAGAATGGCTTCTTGGCAAAGGATCTCCAGGCTGAAGCTCTAAACAAGCTTGATCAAAGAGTGAAAGGAGCATCTGAACAGTTTATGAAGCTCCTTGAGCAGATTGATGCCATGGCATGCCTAGCTCAATGTGACAAGATAGAAGCTGGCATTTCAGATCATCTGGCAAAGATTCAGTCGAAGAACTTGGCGCTGGCTGAATAATGTCAAGGAAAGTCAGCTCATAGTAGTTTCTAGTTCATTGCTCTGTGAGCAATATAAACGACAACAGAGTGCTCCATGTTTGGAGTAGCATATTTATCTGCAATAAGCAATATATGTTAAGAGATTTTTAAGGGAATTGATATTAGAGAATCCAATGTGACACCctaggcatttttttttctccacattgatcttgaattgttttgttactCAGCTCTTCCAAGATCTGTGACTTTAGTTATCTGGAGTCGGTGTttaatttatggatttattCACTGGAGTCCaggctgttttttcattttatat

Function

NR:

description
PREDICTED: BAG family molecular chaperone regulator 1-like

GO:

id name namespace
GO:0051087 chaperone binding molecular_function

KEGG:

id description
K09555 BAG1; BCL2-associated athanogene 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019685 True 980 mRNA 0.43 6 37378722 37384501

Neighbor

gene id symbol gene type direction distance location
AMCG00019682 NA coding downstream 69618 37238889 ~ 37309104 (-)
AMCG00019679 NA coding downstream 158294 37198256 ~ 37220428 (-)
AMCG00019678 NA coding downstream 288759 37072418 ~ 37089963 (-)
AMCG00019675 NA coding downstream 636340 36715937 ~ 36742382 (-)
AMCG00019674 NA coding downstream 662986 36645367 ~ 36715736 (-)
AMCG00019687 chmp5,LOC106590149,LOC106578693 coding upstream 6805 37391306 ~ 37398627 (-)
AMCG00019683 NA coding upstream 36915 37421416 ~ 37425118 (-)
AMCG00019686 NA coding upstream 73592 37458093 ~ 37489142 (-)
AMCG00019688 NA coding upstream 106735 37491236 ~ 37492869 (-)
AMCG00019684 LOC107742139 coding upstream 180769 37565270 ~ 37590061 (-)
G36184 NA non-coding downstream 6594 37369106 ~ 37372128 (-)
G36172 NA non-coding downstream 51728 37325798 ~ 37326994 (-)
G36160 NA non-coding downstream 192566 37167433 ~ 37186156 (-)
G36097 NA non-coding downstream 456916 36921583 ~ 36921806 (-)
G36095 NA non-coding downstream 466743 36911626 ~ 36911979 (-)
G36267 NA non-coding upstream 353774 37738275 ~ 37740601 (-)
G36284 NA non-coding upstream 588952 37973453 ~ 37973683 (-)
G36312 NA non-coding upstream 734219 38118720 ~ 38118934 (-)
G36349 NA non-coding upstream 1069523 38454024 ~ 38454309 (-)
G36386 vps41 non-coding upstream 1234340 38618841 ~ 38619657 (-)
AMCG00019665 NA other downstream 1397186 35934796 ~ 35981536 (-)
G35867 NA other downstream 2323278 35055019 ~ 35055444 (-)
AMCG00019645 NA other downstream 2856452 34510733 ~ 34522270 (-)
G35476 LOC107575789 other downstream 5145324 32222064 ~ 32233398 (-)
AMCG00019597 NA other downstream 5951139 31422029 ~ 31427583 (-)
AMCG00019698 NA other upstream 504943 37889444 ~ 38110224 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other upstream 2032386 39416887 ~ 39505562 (-)
AMCG00019731 NA other upstream 2585674 39970175 ~ 40123987 (-)
AMCG00019741 NA other upstream 4686561 42071062 ~ 42078932 (-)
G36817 NA other upstream 5159615 42544116 ~ 42544524 (-)

Expression


Co-expression Network