AMCG00019686


Basic Information

Item Value
gene id AMCG00019686
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 37458093 ~ 37489142 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019686
ATGCCCTCCCCAAAATGGTGCCTGATCTCTTGTATCACCGTCTTCACAGGCCACATGCTGCTTTGCTTGTCCTCCACGTGGCTCTCCAAGATCCCTTCCCCTGAGCACCCTGGGCTCTTCTCTCTCCGTGTCCATAAAGCGATCACTTTTGAAGAAGGGGGCCACACTTACCTTGATTCCTTCCAACCTCCCTGTCGTGTCAGCTACTTCCTGAGCTCATTGGGCAGCTACAGCACCCAAGCCCAGGATAAAGAGGGACCATGCCTGGACAGCAAACTGGAGGCAGATTTGGACTGTCCAGCCTGTGGCTCTCCACAGCTCAGCCGGATCACTGAAAACATGCTACTGACTCGCCAGCTGCTGTCCCAGAAAGGGGTGGGCATACCCCAAACCCTGGCCTTCATCTTCCACCCTCTCCCCACATCCTGGCCCCCACACCCCAGCATAACAGTAGTTTCAGTCCAGTTGAAAGAACAACTGCAAGAGCTTATGCCTGGAGCCATCGACACATTTCTTCAACATCCAGAATTACAGAGCTGCCATGAAGTTATCGTTCAGCCTTCTGGTGGGGGCTGGTATTCCTGTGATAACGAGACGACCCTTGTGAAGAGGGACAGGGAAGGAGTCCTCAGTGCCACACTAGCTCTCCTGCCCAGGATCCAGGAAGGAGAGTCCATTCTCATCTCAGCATCTTATGAATCGGTCCAGCCTCAGAAACCACTGAAGCTGGAACAGAGCGTAGCTTTTAAAGGACAAGGAGTAAATAGTACTACTAACATAATATTACTACTTACAGTGCTCTGTTGTTGTGTTCAGGTGGTGTGCTGGGTGGATAAGGCGGAGGCTCCAGCCAGTGCAAGGTCCACTGTGCTGCAGACTCTGGAGGTCACTCTGCAGGAGTGGGGCTTCACACAAGACGACCTCACTGCCATTCAGCAGATCATTAAACAGTGGGCTGAGGCAGctatgcaggctgtcatggacTATCAGTCACAGCTCTCAGACCAGGACAAGGGTGGAGCTGGAGCTCAGACTGATCTGATAGGGGTGGAGTTTGCACTGATGCAGCAGGATGGAAAACTGCGCCCTCTTCTCCTGAGGTTGACTGCCCACCACAGAGGGGTTTACAGCACAGCCTTCAGTCTCCTGATGCTCCCAAGGCTGGCCCATACTGTGGAACCCCTCCTACAGACCATGTGCCAAAGAGCCCACTCCTTCTTCATAGCCGGGAAGACAATACTTGTAATCGGAGGAGGCGAGTCCAAGAAGATGTCCGTGTGGCACACAGCCAAGAAGCAAAACATCAGGgtaaTCTTGGTAAATCCCGAATCAGATCACCCTGCAACCCACCTGGTGTGGAAATTTCTGCATTACAATTTTACTGATCACTCACAAGATGAAGCTCATGCCTGCAATATAGCCAGAATGATATGTGAGTCAAATCTGAATATCAATGGCTGCTTAACATTTGTTTGTAACTGTTCTATTCTGACTTCTCTTGTGTGCCAAGAGCTACGTCTCCCTAGTAATGGTGTTGAAGTGATCAACATTGCCAAAAAGAAAAGTCACACCCAGCAGCACTTGGGAAGAGTTGCTCACAGTCTGCAGCACTTCCCTGATGTCTCACTCTACACAGTGCCCTGCTTGCAAGTCAACAGTCCAGCAGAGCTTCAAGAGGTGACAGAGAAAGTTGAGTTCCCTGTGGTAATGAAACTACAATACAGCGCAGATGCATTGGGTGTCAAAATGGTAGAGAATCTCCAGCAATGTCAGGAATTCTTTGATAGCATACAACATGAAGAACTTTTCACTCTGGGAATTGGACAAAAACCATTGCTAATGGAGTATGTGGGGGGGATGAAGCATGATGTTGACCTGATCATCTTCAGTGGGAAGTTACTGGCTGCCTTTGTCTCCGACTGTGGGCCTTCTCATCTCCCTTACTTTCTGAACTCATCACACAGCATGCCCTCTAAGCTCTGTCCTGAGAAGGTGACCCAGCTGGTCACTGCAGCTTACCAGAGCTGTACCTACTGTGGCCTGAAGAACGGTGTCTTCAATGTTGACTTAAAAATGACTGAAACAGGTCCAAAACTCATAGAGATCAATCCAAGAATGGGTGGGAACTACTTGCCTGCCTGGATTAAGGCTGTCTACGGATTTGACCTTATTCTGGCTAGCTTTCTAATTGCCTTTGATATCCGACCACATGCTTGGACCCCAGAGCCCAGGGGCCACGTTGCTGGGATCTCAACCTCCATGACTCAGTATCTGCAGGCCTTAGAAAACCATTCATTCActgcaaatttaaataatttggagaTAAATGGAATTATCCATAGTTCTATGATAAGAGATGAGTCCAGCAAATCTGGCTTTGAAGTTGCCGCTCTTAACATTTCCAGCTTTAGCCCCAGCAAGGAGGAAGTCTTCAAGAGACTCCTGATTGTCTCAAAAATCCTTGGATTGGATTCTAAAGAGCATCCAGCTCTCTCCAATACCAGGATGCAACAGACTGCAGACACAAAGAAAGACCATGAAGCAACAGTTCAGGGTTCTCATTACAATGTGGCTGAGCATCTGAGCCACGATGGGGGAGATGGCTCTCATCTTCAGCAGGAGGACGACACGTCAGCGCTACAGCTGTACCACTCTCTACAGCAGATACtactggagctggggctgccaGAGACTAGAGACCGCACAACACCACGAGGCCACATGCTGCTTTGCTTGTCCTCCACGTGGCTCTCCAAGATCCCTTCCCCTGAGCACCCTGggctcttctctctctgtgtccataAAGCGATCACTTTTAAAGAAGGGGGCCACACTTACCTTGATTCCTTCCAACCTCCCTGTCGTGTCAGCTACTTCCTGAGCTCATTGGGCAGCTACAGCACCCAAGCCCAGGATAAAGAGGGACCATGCCTGGACAGCAAACTGGAGGCAGATTTGGACTGTCCAGCCTGTGGCTCTCCACAGCTCAGCAGGATCACTGAAAACATGCTGCTGACTCGCCAGCTGCTGTCCCAGAAAGGGGTGGGCATACTCCAAACCCTGGCCTTCTCCTTCCACCCTCTCCCCACATCCCGGCCCCCACACCCCAGCATAACAGTAGTTTCAGTCCAGTTGAAAGAACAACTGCAAGAGCTTATGCCTGGAGCcatcaacacatttcttcaACATCCAGAATTACAGAGCTGCCATGAACCTTCTGGTGGGGGCTGGTATTCCTGTGATAACGAGACGACCCTTGTGAAGAGGGACAGGGAAGGAGTCCTCAGTGCCACACTAGCTCTCCTGCCCAGGATCCAGGAAGGAGAGTCCATTCTCATCTTAGCATCATATGAGTCGGTCCAGCCTCAGAAACCACTGAAGCTGGAACAGAGCATAGCTTATCAA

Function

GO: NA

KEGG:

id description
K14755 CRNS1, ATPGD1; carnosine synthase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019686 True 3405 mRNA 0.50 8 37458093 37489142

Neighbor

gene id symbol gene type direction distance location
AMCG00019683 NA coding downstream 32975 37421416 ~ 37425118 (-)
AMCG00019687 chmp5,LOC106590149,LOC106578693 coding downstream 59466 37391306 ~ 37398627 (-)
AMCG00019685 LOC106593846 coding downstream 73592 37378722 ~ 37384501 (-)
AMCG00019682 NA coding downstream 148989 37238889 ~ 37309104 (-)
AMCG00019679 NA coding downstream 237665 37198256 ~ 37220428 (-)
AMCG00019688 NA coding upstream 2094 37491236 ~ 37492869 (-)
AMCG00019684 LOC107742139 coding upstream 76128 37565270 ~ 37590061 (-)
AMCG00019692 si:dkey-37o8.1,LOC108434235,LOC107681461,LOC108256503,LOC105019383 coding upstream 252367 37741509 ~ 37745656 (-)
AMCG00019701 NA coding upstream 718740 38207882 ~ 38222789 (-)
AMCG00019703 NA coding upstream 773750 38262892 ~ 38263670 (-)
G36184 NA non-coding downstream 85965 37369106 ~ 37372128 (-)
G36172 NA non-coding downstream 131099 37325798 ~ 37326994 (-)
G36160 NA non-coding downstream 271937 37167433 ~ 37186156 (-)
G36097 NA non-coding downstream 536287 36921583 ~ 36921806 (-)
G36095 NA non-coding downstream 546114 36911626 ~ 36911979 (-)
G36267 NA non-coding upstream 249133 37738275 ~ 37740601 (-)
G36284 NA non-coding upstream 484311 37973453 ~ 37973683 (-)
G36312 NA non-coding upstream 629578 38118720 ~ 38118934 (-)
G36349 NA non-coding upstream 964882 38454024 ~ 38454309 (-)
G36386 vps41 non-coding upstream 1129699 38618841 ~ 38619657 (-)
AMCG00019665 NA other downstream 1476557 35934796 ~ 35981536 (-)
G35867 NA other downstream 2402649 35055019 ~ 35055444 (-)
AMCG00019645 NA other downstream 2935823 34510733 ~ 34522270 (-)
G35476 LOC107575789 other downstream 5224695 32222064 ~ 32233398 (-)
AMCG00019597 NA other downstream 6030510 31422029 ~ 31427583 (-)
AMCG00019698 NA other upstream 400302 37889444 ~ 38110224 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other upstream 1927745 39416887 ~ 39505562 (-)
AMCG00019731 NA other upstream 2481033 39970175 ~ 40123987 (-)
AMCG00019741 NA other upstream 4581920 42071062 ~ 42078932 (-)
G36817 NA other upstream 5054974 42544116 ~ 42544524 (-)

Expression


Co-expression Network