AMCG00019694


Basic Information

Item Value
gene id AMCG00019694
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 37608075 ~ 37619035 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019694
ATGGACTCTATAACTCCTGTCACAAGACGCATGAAGATTTGCTATCTCGGAGGTGGCAATGTGGCTTCCATTCTTTCCCTACTGTCTGATAAAAAGGTAGAAAGAGCAGGAGCAAaacttgaaaaaaatgtaagcatGTATCCAGAAGACCCCCAGAAAGTAAAGCTTGACCATATTGACCTGGTGAACTACATATTCTGTCAGATTGCTCTTGTGTGTACCTTACCTCGCTCTTCAAAGCTTGTCACGCTTGAGAAACTACAAGACTTCAGCATGCAACTCCATAAGGAATGGAACAATGCATCTCCTCCTGGTGCCTTCTTCttacttttgttgttattttggccAAAAGATGCACAAAACAAGGTGCCCAATCAGCAGAGAAACAATATTCTCATGTCAGCAGTAGATACCCTGCAACgcttttataatattaaactaAAGAATATTGCATTAAGAAAGAAGATAATCTACACCCACTTCTTCCTGGGCTGGGGGAAAAGATTAAGCaagattgaaaaatacattaaagggACTCTCAGTGAGAGGAGGCTCAAGTGGCTCAGTGGGGAGGTATGGACGACCTCAGGGGTCACCCAGTTGCTGAAATGTGTCAAAGGATGGACTAAGAGTGgaaacttgtttgtttgtggctACAGCAAGGGCAGCAAGATCAAAGTTTTCCCTTTGTATTCAGCTTCTCTGCCCACTGCCAatgaaaatatcacattttttcTGGGCTTCTCCTTTAATGGAGCAGTTGCTTTTGATATCCAGATCCTGTCCATTGTAACTTCCCTTCCTGTCCTTGCGTGGCTGCTGCTCTATTCCCGGGACCCATATGGAGACAAATCACTGGCCTGGCCTCGTACGTTTTCTGCGGTAAATGGCCTCAGCGTGCGTTACAGCGGGATTAAGCAGGGCGGGCACAATGAGCTGAATATGCTGCCTTTTGGAGATCCTCTCTATCGCCACAACGACCTGCTTCTCGATTTCCTGCACAAAGTGCGGCTGGAGGTTGCAGTTGCGGCAGTGTCGGTAAGAGACAGCAGTGTGAGACCGCCTAACACAATACCAGAGACATCAGGATTGCTGCTGACTGGTGAGGAAGAGGGAATGAGGGGACCGATGGGGGGATGCAAGGCGCACGCCAGGCACGGCCCAGCCCGGGGAGACCGAGGGACGAGAGACACGGTGTCCCCCAGACGGGCGTGCACTCCCCCTCGGACAACACGGCCGATCGAGGTGCTTCACCGTGTTTTCTCCGGCACCTGCCCGGGAGGATGTACTCGGCTGCAAATGTCTTCCCCGGCGCACAGGGCGGCGGTGTTGCGTGTGACTGTAGGCATGCGCAGAAGTCTTCCTTGTTTGTCCCCGTGA

Function

GO:

id name namespace
GO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019694 True 1380 mRNA 0.50 4 37608075 37619035

Neighbor

gene id symbol gene type direction distance location
AMCG00019695 NA coding upstream 355 37606460 ~ 37607720 (+)
AMCG00019693 NA coding upstream 1695 37604513 ~ 37606380 (+)
AMCG00019691 NA coding upstream 188528 37409768 ~ 37419547 (+)
AMCG00019689 NA coding upstream 201644 37399600 ~ 37406431 (+)
AMCG00019681 NA coding upstream 229396 37372379 ~ 37378679 (+)
AMCG00019696 NA coding downstream 5919 37624954 ~ 37625467 (+)
AMCG00019690 NA coding downstream 60367 37679402 ~ 37739848 (+)
AMCG00019697 fam49b,fam49bb,LOC107748306,LOC107691432 coding downstream 174054 37793089 ~ 37808217 (+)
AMCG00019700 ankh,ankhb,LOC107657429,LOC107713990,LOC108437249,LOC107701025 coding downstream 543369 38162404 ~ 38205659 (+)
AMCG00019699 NA coding downstream 613140 38232175 ~ 38233708 (+)
G36189 NA non-coding upstream 218113 37388328 ~ 37389962 (+)
G36130 NA non-coding upstream 367581 37238889 ~ 37240494 (+)
G36106 NA non-coding upstream 547431 37060418 ~ 37060644 (+)
G36098 NA non-coding upstream 661577 36946101 ~ 36946498 (+)
G36094 NA non-coding upstream 696096 36911541 ~ 36911979 (+)
G36370 NA non-coding downstream 1236804 38855839 ~ 38857856 (+)
G36454 NA non-coding downstream 1463075 39082110 ~ 39082411 (+)
G36464 LOC103376870 non-coding downstream 1638996 39258031 ~ 39258546 (+)
G36497 NA non-coding downstream 1773457 39392492 ~ 39430557 (+)
G36516 NA non-coding downstream 2088031 39707066 ~ 39709540 (+)
G36212 NA other upstream 92048 37513987 ~ 37516027 (+)
AMCG00019676 NA other upstream 394556 37178359 ~ 37213519 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other upstream 1308528 36292346 ~ 36299547 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other upstream 1544225 36046477 ~ 36063850 (+)
AMCG00019641 NA other upstream 2756752 34840316 ~ 34851323 (+)
AMCG00019708 vps41,LOC102790284 other downstream 959281 38578316 ~ 38632178 (+)
AMCG00019747 tubb6,LOC108431516,LOC100711323,LOC107688430 other downstream 4937505 42556540 ~ 42572080 (+)
AMCG00019751 NA other downstream 5005695 42624730 ~ 42627105 (+)
AMCG00019755 NA other downstream 5341621 42960656 ~ 42962658 (+)
AMCG00019758 NA other downstream 5642859 43261894 ~ 43271192 (+)

Expression


Co-expression Network