AMCG00019707


Basic Information

Item Value
gene id AMCG00019707
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 38816499 ~ 38819280 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019707
aGGGTGAGACCGCAGCAacgttggaacaaaaacctacAATGACGAAAACGACTGGCAAATCTGCGAGAATTAGTTGCAAAATTTCTGGAATAGACGTTAGTAGCACTATTATCCACTGGTACCAGCAGAAAGAAGGCGAAGCTTTGAAAAGGATCCTGTACGTATCTACAGGAACTGCACTTGACAAAGGTTTCATCgctgaaaaaaatgctgttgcTAAAGAATGCAATCTTAACATAGTACGATTGGACAAGCAGCACAACGCGATGTACTATTGCGCCTATTGGGACACTCACAGTGAAATACAACCCATATGCAGTCTGCACAAAAACCTTCTAACTGttgCAGAGGCAGAAATCACTTTGGAACAAGAAAGGATGACACTGACGAGatcaaaaaccaaaacagcCCGGATTAGGTGCAAATTGTCTGGGACAGACTTTGGCAGTGCTTATATTCACTGGTACCAGCAGAAAGAAGGCCAAGCTTTAAATAGGATTCTTTACATAGCTGGTGCAACCCCTGTATATGACCAAGACTCCAATAAACCTTTTTTCACTGCAGAAAAGGACACTAATGCTAAAGAGTCCATTCTT

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG:

id description
ko04672 Intestinal immune network for IgA production

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019707 True 596 mRNA 0.42 2 38816499 38819280

Neighbor

gene id symbol gene type direction distance location
AMCG00019706 NA coding downstream 40655 38768161 ~ 38775844 (-)
AMCG00019705 vps41 coding downstream 189695 38626274 ~ 38626804 (-)
AMCG00019704 LOC106590158 coding downstream 465883 38342972 ~ 38350616 (-)
AMCG00019702 NA coding downstream 547176 38266354 ~ 38269323 (-)
AMCG00019703 NA coding downstream 552829 38262892 ~ 38263670 (-)
AMCG00019712 stard3nl coding upstream 22862 38842142 ~ 38865670 (-)
AMCG00019711 epdr1,LOC107664036,LOC107558964 coding upstream 65726 38885006 ~ 38893548 (-)
AMCG00019715 NA coding upstream 83523 38902803 ~ 38907186 (-)
AMCG00019714 NA coding upstream 110125 38929405 ~ 38953013 (-)
AMCG00019713 LOC106599471,LOC105920328 coding upstream 160830 38980110 ~ 38989131 (-)
G36386 vps41 non-coding downstream 196842 38618841 ~ 38619657 (-)
G36349 NA non-coding downstream 362190 38454024 ~ 38454309 (-)
G36312 NA non-coding downstream 697565 38118720 ~ 38118934 (-)
G36284 NA non-coding downstream 842816 37973453 ~ 37973683 (-)
G36267 NA non-coding downstream 1075898 37738275 ~ 37740601 (-)
G36456 NA non-coding upstream 259223 39078503 ~ 39081979 (-)
G36470 NA non-coding upstream 426512 39245792 ~ 39293373 (-)
G36495 NA non-coding upstream 560528 39379808 ~ 39380708 (-)
G36534 NA non-coding upstream 887322 39706602 ~ 39709528 (-)
G36539 gtpbp4 non-coding upstream 993030 39812310 ~ 39813571 (-)
AMCG00019698 NA other downstream 706275 37889444 ~ 38110224 (-)
AMCG00019665 NA other downstream 2834963 35934796 ~ 35981536 (-)
G35867 NA other downstream 3761055 35055019 ~ 35055444 (-)
AMCG00019645 NA other downstream 4294229 34510733 ~ 34522270 (-)
G35476 LOC107575789 other downstream 6583101 32222064 ~ 32233398 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other upstream 597607 39416887 ~ 39505562 (-)
AMCG00019731 NA other upstream 1150895 39970175 ~ 40123987 (-)
AMCG00019741 NA other upstream 3251782 42071062 ~ 42078932 (-)
G36817 NA other upstream 3724836 42544116 ~ 42544524 (-)
G36862 NA other upstream 3825044 42644324 ~ 42656393 (-)

Expression


Co-expression Network