Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019713 |
| gene name | LOC106599471,LOC105920328 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 38980110 ~ 38989131 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: extended synaptotagmin-2-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019713 | True | 363 | mRNA | 0.49 | 4 | 38980110 | 38989131 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019714 | NA | coding | downstream | 27097 | 38929405 ~ 38953013 (-) |
| AMCG00019715 | NA | coding | downstream | 72924 | 38902803 ~ 38907186 (-) |
| AMCG00019711 | epdr1,LOC107664036,LOC107558964 | coding | downstream | 86562 | 38885006 ~ 38893548 (-) |
| AMCG00019712 | stard3nl | coding | downstream | 114440 | 38842142 ~ 38865670 (-) |
| AMCG00019707 | NA | coding | downstream | 160830 | 38816499 ~ 38819280 (-) |
| AMCG00019719 | NA | coding | upstream | 92971 | 39082102 ~ 39097112 (-) |
| AMCG00019720 | NA | coding | upstream | 206363 | 39195494 ~ 39195833 (-) |
| AMCG00019721 | LOC106599479 | coding | upstream | 374833 | 39363964 ~ 39370197 (-) |
| AMCG00019725 | NA | coding | upstream | 721856 | 39710987 ~ 39728290 (-) |
| AMCG00019727 | larp4b,LOC106599484 | coding | upstream | 744258 | 39733389 ~ 39740243 (-) |
| G36386 | vps41 | non-coding | downstream | 360453 | 38618841 ~ 38619657 (-) |
| G36349 | NA | non-coding | downstream | 525801 | 38454024 ~ 38454309 (-) |
| G36312 | NA | non-coding | downstream | 861176 | 38118720 ~ 38118934 (-) |
| G36284 | NA | non-coding | downstream | 1006427 | 37973453 ~ 37973683 (-) |
| G36267 | NA | non-coding | downstream | 1239509 | 37738275 ~ 37740601 (-) |
| G36456 | NA | non-coding | upstream | 89372 | 39078503 ~ 39081979 (-) |
| G36470 | NA | non-coding | upstream | 256661 | 39245792 ~ 39293373 (-) |
| G36495 | NA | non-coding | upstream | 390677 | 39379808 ~ 39380708 (-) |
| G36534 | NA | non-coding | upstream | 717471 | 39706602 ~ 39709528 (-) |
| G36539 | gtpbp4 | non-coding | upstream | 823179 | 39812310 ~ 39813571 (-) |
| AMCG00019698 | NA | other | downstream | 869886 | 37889444 ~ 38110224 (-) |
| AMCG00019665 | NA | other | downstream | 2998574 | 35934796 ~ 35981536 (-) |
| G35867 | NA | other | downstream | 3924666 | 35055019 ~ 35055444 (-) |
| AMCG00019645 | NA | other | downstream | 4457840 | 34510733 ~ 34522270 (-) |
| G35476 | LOC107575789 | other | downstream | 6746712 | 32222064 ~ 32233398 (-) |
| AMCG00019724 | dip2c,dip2ca,LOC106522911,LOC106532211 | other | upstream | 427756 | 39416887 ~ 39505562 (-) |
| AMCG00019731 | NA | other | upstream | 981044 | 39970175 ~ 40123987 (-) |
| AMCG00019741 | NA | other | upstream | 3081931 | 42071062 ~ 42078932 (-) |
| G36817 | NA | other | upstream | 3554985 | 42544116 ~ 42544524 (-) |
| G36862 | NA | other | upstream | 3655193 | 42644324 ~ 42656393 (-) |
