AMCG00019722 (LOC105017907,LOC106568825)


Basic Information

Item Value
gene id AMCG00019722
gene name LOC105017907,LOC106568825
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 39382147 ~ 39414885 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019722
ATGGTGGGGAATCTGGTGTCTGGGAAGAGGATAGCACAGGCCAGCGGCAGAGATCTGGGCCAGATCGAAGACAATGACCAGGCAagaaagttcctcttcctgtcagaggtGTTACAGTGGAGAGCCCAGACCACCCCAGACCACGTGCTGTTCACTCTGCTCAATTCAAGGGGTACCATCGCTAGCTCCTTGACCTGCCTCCAGCTCCACAAGCGAGCAGAGAAGATTGCTGCCATGTTGGCAGAGCGGGGGCACCTGCAGGATGGGGACCACGTGGCTCTCGTCTACCCCCCAGGCATAGATCTAATCGCGGCATTTTATGGGTGCCTGTATGCTGGTTGTGTGCCAATCACAGTGAGACCACCACATCCTCAGAATATCGCCACAACCCTGCCCACTGTAAAGATGATTGTGGAGGTCAGCAGGTCAGCGTGCATAATGACGACACAGGGAATCTGCAAACTGCTGAGGTCCAGAGAGGCGTCGGCCGCGGTGGACGTCAGGACGTGGCCTCCAGTCCTGGACACAGATGATTTGCCAAAGAAGAGGCCCCCTCAGCTGTACAAACCCTCCAATCCGGACACTTTGGCCTACCTGGATTTTAGCGTTTCTACCACCGGAATGCTAGCAGGAGTAAAGATGTCTCACACAGCCACCAGTGCCTTTTGCCGTTCAATCAAGCTGCAGTGTGAGCTGTACCCGTCCCGAGAGGTAGCTATCTGCTTAGACCCTTACTGCGGCCTGGGATTTGTGCTCTGGTGTCTTTGTAGTGTGTATTCAGGACACCAGTCTATCCTCATCCCACCCTCGGAACTGGAGACAAACCCAGCGCTGTGGCTTCTCGCAGTCAGTCAGTACAAAGTGAGGGACACGTTCTGTTCCTACTCTGTGATGGAGCTATGCACCAAGGGCCTTGGACTGCAGACAGAATCGCTCAAGTCTCGGGGTCTGGACCTGTCTCGCGTGCGGACATGCGTGGTGGTGGCGGAGGAGCGGCCCCGGATAGCACTGACCCAGTCCTTCTCCAAGCTCTTCAAGGACCTGGGTCTTCACCCCCGAGCCGTTAGCACCTCCTTTGGCTGCAGAGTCAACCTTGCCATTTGCCTACAGCCTCACAGGCTGGGGAAGCTGGCCGAGCAGGTAGGGGATTTTCATGTTCCCTAA

Function

NR:

description
PREDICTED: disco-interacting protein 2 homolog C isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019722 True 1164 mRNA 0.56 10 39382147 39414885

Neighbor

gene id symbol gene type direction distance location
AMCG00019723 NA coding upstream 53306 39317255 ~ 39328841 (+)
AMCG00019718 NA coding upstream 318074 39033581 ~ 39064073 (+)
AMCG00019717 NA coding upstream 541767 38838764 ~ 38840380 (+)
AMCG00019710 NA coding upstream 549674 38825792 ~ 38832473 (+)
AMCG00019716 NA coding upstream 610355 38763195 ~ 38771792 (+)
AMCG00019728 gtpbp4,LOC107721733 coding downstream 397192 39812077 ~ 39830831 (+)
AMCG00019730 wdr37,LOC102795438 coding downstream 440300 39855185 ~ 39889023 (+)
AMCG00019729 NA coding downstream 499097 39913982 ~ 39919021 (+)
AMCG00019733 NA coding downstream 1276631 40691516 ~ 40702922 (+)
AMCG00019732 NA coding downstream 1303598 40718483 ~ 40729666 (+)
G36464 LOC103376870 non-coding upstream 123601 39258031 ~ 39258546 (+)
G36454 NA non-coding upstream 299736 39082110 ~ 39082411 (+)
G36370 NA non-coding upstream 524291 38855839 ~ 38857856 (+)
G36189 NA non-coding upstream 1992185 37388328 ~ 37389962 (+)
G36130 NA non-coding upstream 2141653 37238889 ~ 37240494 (+)
G36516 NA non-coding downstream 292181 39707066 ~ 39709540 (+)
G36585 NA non-coding downstream 933319 40348204 ~ 40348476 (+)
G36586 NA non-coding downstream 954347 40369232 ~ 40369540 (+)
G36588 NA non-coding downstream 966338 40381223 ~ 40381424 (+)
G36597 NA non-coding downstream 1039298 40454183 ~ 40454484 (+)
AMCG00019708 vps41,LOC102790284 other upstream 749969 38578316 ~ 38632178 (+)
G36212 NA other upstream 1866120 37513987 ~ 37516027 (+)
AMCG00019676 NA other upstream 2168628 37178359 ~ 37213519 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other upstream 3082600 36292346 ~ 36299547 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other upstream 3318297 36046477 ~ 36063850 (+)
AMCG00019747 tubb6,LOC108431516,LOC100711323,LOC107688430 other downstream 3141655 42556540 ~ 42572080 (+)
AMCG00019751 NA other downstream 3209845 42624730 ~ 42627105 (+)
AMCG00019755 NA other downstream 3545771 42960656 ~ 42962658 (+)
AMCG00019758 NA other downstream 3847009 43261894 ~ 43271192 (+)
G36954 NA other downstream 3915407 43330292 ~ 43333313 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location