AMCG00019731


Basic Information

Item Value
gene id AMCG00019731
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 39970175 ~ 40123987 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019731
ATGTCGGACACCTGGTggacagagaaggagaaagcTAAGCTGCTGCTGTCACAGGAGCACAACAACAGCACCAGTCTGAAGTATTTTTACAGCTCCCTGCTTGCTTTTACACCACATGTCACAGGCAGGATGAGCAAGGGGGCTATCATGATGACATTGGCTCTATCTGTCATTGAGCAGAGGTCAGGGGATGCAATGAAAAAGCAACAGCAGGACCCGTGCCGTGTCCTGATGAGCGAGAAAGTCAGCATGCTGTCTGCCTTCATTGGTCCTTTCAAATATATGAGTCCTGGAACTACAAACACAGAAGATGAAGACAATTTAAGTACTAGTAGTGCGGAAGTGAAGGAGAATCGGAACGTGGGTAATTTAGAGGACTGCGCCATCGTTCAGGGAGACCGCCAGTCATTCTTTTGCACTGACATGGCCAGGAGTGGGGGCTCGGGCCTCAAAAGGAAAAGGCCCCTGGAGGAAGGAAACAGCGGACACCTCTGCAAACTACAGCTGATCTACAAGAAACTCTCCTGGTCAGTCACACCAAAGAACGCCCTGGTCCAGCTGAACGAACTGAAGCCTGGTTTACAGTACAGAATGGTCTCGCAGACAGGGCCTGTGCACGCCCCTGTCTTCTCCATTGCCGTGGAGGTCAACGGGCTGACCTTCGAAGGCACGGGCCCCACCAAGAAGAAAGCCAAGATGAGGGCGGCAGAGCTGGCTCTCAAGTCTTTTGTGCAGTTTCCCAACGCTTCTCAGGCTCATGTGGCGATGGGCAACCTCAGCAGCCCATCCACAGACTTCACCTCCGACCAGGCTGACTTCCCTGACACGCTGTTCAAAGAGTTCGAGCCGGCAGGGGCAGCGGGGGCGGTGGCGGCGGCTGCAGCAGTGGCACGCGGAGATAACTCCCTGTGCTGCCGGGCTACCGAGAACGAATTTCTCTCCAATGCGTGTCGGCACGGGCGCCTGTTCTGCCACACGCTGGACTTAATGGTCCAGGCCAAGCAGAACAAGCAGAAAATGGCCAGCCCGGCGGGCGGGGGAGAGAAGAACCCTGTGGGGCTGCTCAATGAGCTGCGGCCAGGGCTACGCTATGTGTGCCTCTCGGAGACGGTGGAGCGACGGCATGTCAAGACCTTTGTCATGGCAGTCAGAGTGGATGGGAGGATATTCGAAGGATCTGGGCGCAGCAAGAAGCTGGCTAAGGCCCAGGCAGCACAAACGGCTCTGCAGGCTCTCTTTAACATCAGGCTGGCACCTGAGGGGAGGGCCAGCCATATACACAGCAGGAGTAAAAGCCCTCATTTACCACAGGTCAGAAAATAG
>TU45719
CTACCAGCCAACTCAAATGCAAGTTcaagagaaggaggaggaggaggtcgAAGAGAAAAGAGAAAGTCAGCATGCTGTCTGCCTTCATTGGTCCTTTCAAATATATGAGTCCTGGAACTACAAACACAGAAGATGAAGACAATTTAAGTACTAGTAGTGCGGAAGTGAAGGAGAATCGGAACGTGGGTAATTTAGAGGACTGCGCCATCGTTCAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019731 True 1323 mRNA 0.56 6 39970175 40044291
TU45719 False 217 lncRNA 0.45 3 39972756 40123987

Neighbor

gene id symbol gene type direction distance location
AMCG00019726 idi1,LOC107713854 coding downstream 139588 39826355 ~ 39830587 (-)
AMCG00019727 larp4b,LOC106599484 coding downstream 229932 39733389 ~ 39740243 (-)
AMCG00019725 NA coding downstream 241885 39710987 ~ 39728290 (-)
AMCG00019721 LOC106599479 coding downstream 599978 39363964 ~ 39370197 (-)
AMCG00019720 NA coding downstream 774342 39195494 ~ 39195833 (-)
AMCG00019734 NA coding upstream 605706 40729693 ~ 40766188 (-)
AMCG00019738 NA coding upstream 1423931 41547918 ~ 41563384 (-)
AMCG00019739 NA coding upstream 1450289 41574276 ~ 41576305 (-)
AMCG00019743 tmx3,zgc:152808 coding upstream 2264993 42388980 ~ 42406310 (-)
AMCG00019744 NA coding upstream 2290623 42414610 ~ 42442771 (-)
G36557 NA non-coding downstream 68418 39897887 ~ 39901757 (-)
G36539 gtpbp4 non-coding downstream 156604 39812310 ~ 39813571 (-)
G36534 NA non-coding downstream 260647 39706602 ~ 39709528 (-)
G36495 NA non-coding downstream 589467 39379808 ~ 39380708 (-)
G36470 NA non-coding downstream 676802 39245792 ~ 39293373 (-)
G36576 NA non-coding upstream 65833 40189820 ~ 40191361 (-)
G36582 NA non-coding upstream 211156 40335143 ~ 40335556 (-)
G36590 NA non-coding upstream 280264 40404251 ~ 40404583 (-)
G36605 NA non-coding upstream 522486 40646473 ~ 40646687 (-)
G36650 NA non-coding upstream 878075 41002062 ~ 41002677 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other downstream 464613 39416887 ~ 39505562 (-)
AMCG00019698 NA other downstream 1859951 37889444 ~ 38110224 (-)
AMCG00019665 NA other downstream 3988639 35934796 ~ 35981536 (-)
G35867 NA other downstream 4914731 35055019 ~ 35055444 (-)
AMCG00019645 NA other downstream 5447905 34510733 ~ 34522270 (-)
AMCG00019741 NA other upstream 1947075 42071062 ~ 42078932 (-)
G36817 NA other upstream 2420129 42544116 ~ 42544524 (-)
G36862 NA other upstream 2520337 42644324 ~ 42656393 (-)
G36982 NA other upstream 3174244 43298231 ~ 43360906 (-)
AMCG00019761 NA other upstream 3206302 43330289 ~ 43342706 (-)

Expression


Co-expression Network