AMCG00019738


Basic Information

Item Value
gene id AMCG00019738
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 41547918 ~ 41563384 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019738
aTGGCTATAATAATTGTGCAATGCCCGTGTCACTTAGGCATCATCGTGACGTCTTGGCCGGACTTGGACAGAGAAGCCAAGGAGCAACACCTTGTCATTGTCCAGGTGAAAGATATGGTGGGCCAGATGGGTGGATTCTCTTCAACAGCCACAGTCACCATCAACCTGTCTGATGTCAATGACAACGGCCCCAAATTTCAGCACATGGGCACCACCGTGGGCCGGATTATGGCCGATGACAGTGATGTGGGTCTGAACGCAAAGATGAATTACACCATAGAGGAAGTGGAGAGCACGGGTGTGTTTACGATCATCACTGATGCCAGCACTCAGGAAGGAGTGATTATTCTTCAACAGCCTTTGGACTATGAAAGTAAAAGGAGGTTTGTCATATCGGTTGAAGCGATAAACAGCTACATAGACACACGGTTTCTCAGCTTCAACCAGTTCAGAGACAAAACCATTGTGAAAGTAATGGTGGTGGATGTAGATGAGCCGCCCATATTTAATCCCCATGAGTATGTGTGGGATGTCCTGGAAAATGCAGCCGTTGGAGCGGAAGTTGGCAGGGTGTCTGCAGCGGACAGAGATGCAGCCAGTAATCCCATTAGGTATTACATTAATAGAGGCAGTGATATgaagaaaatgttcaaaatagATCTGCACAATGGAACAATTACTATTGCAAAATCCTTGGACTGGGAGACAGCGCGGTGGCACATTTTAACTGTTTCAGCCAGAGAAACAAgtcAAAATTATCTGTCTTCTGAAGCACTTGTCACCATTAAAGTTACTGATGTAAATGATAATGCACCCCAATTGTCCAGATCTTATTCACCACATGTATGTGAAGCCACTTGCCTGTATGCATGTGTGAGGATACGGGCGATTACTTACTCACTTATGCTTTTCAATATTTCAGATAACACTGCGGGCGTGCTCACAAGAAGGAGCAGTTTTAGCAGGAAGGATCGCTCTTTTTATTACCTGCCCATTGTTGTTGCTGACAGTGGCACTCCAGCCCTCACTAGCACCACGACTCTCACCATCAAAGTCTGCAGTTGCTACCCAGATGGAAATTGTAGATCTGGCGGTGTGGAGGCTTTCGCCCTGTCTGTTGGTCTTAGTGTCAAGACCCTGATTGCAATTGCATCCTGCctgctaataataatagTCCTTCCATTACTAATACTGGCAGTGAGGAGGCACAAGAAGAAGCAGCCAaggggagagagatgggaggaGGTGGCAGAAAACGTTATGTGTTACACCGACAAGGGCAATTGGGAGGAGGAGTCGAAAGCTTTTGACCCCGTCACTCTGAGAACCAACACAAAGAGGCAGGATCGGAAAACCCGAAAAGAGCAGCTGGTCGCCAGCATCCGTATGTCCCTGAGGCGTTCATTTTGGATCGGTCCCGAGGACGATGTTTTCAGGCAGTTTATTTTGGAGAGGCTGTTTGAAACTGACACTGATCCTTGCGGTCCTCCTTTTGATTGTTTACAGACGTTTGCCTTTGAAGGGACAGGTTCATTGGCTGGGTCACTTAGTTCTCTGGAATCGTGTGCCTCCGAACAGAACTATGATTACCTTAGTGAATTGGGGCCGTTGTTCAAAAGACTGGCACACATGTAT

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019738 True 1635 mRNA 0.47 8 41547918 41563384

Neighbor

gene id symbol gene type direction distance location
AMCG00019734 NA coding downstream 781730 40729693 ~ 40766188 (-)
AMCG00019726 idi1,LOC107713854 coding downstream 1717331 39826355 ~ 39830587 (-)
AMCG00019727 larp4b,LOC106599484 coding downstream 1807675 39733389 ~ 39740243 (-)
AMCG00019725 NA coding downstream 1819628 39710987 ~ 39728290 (-)
AMCG00019721 LOC106599479 coding downstream 2177721 39363964 ~ 39370197 (-)
AMCG00019739 NA coding upstream 10892 41574276 ~ 41576305 (-)
AMCG00019743 tmx3,zgc:152808 coding upstream 825596 42388980 ~ 42406310 (-)
AMCG00019744 NA coding upstream 851226 42414610 ~ 42442771 (-)
AMCG00019748 NA coding upstream 928680 42492064 ~ 42507976 (-)
AMCG00019749 NA coding upstream 970520 42533904 ~ 42542454 (-)
G36652 NA non-coding downstream 537515 41010200 ~ 41010403 (-)
G36650 NA non-coding downstream 545241 41002062 ~ 41002677 (-)
G36605 NA non-coding downstream 901231 40646473 ~ 40646687 (-)
G36590 NA non-coding downstream 1143335 40404251 ~ 40404583 (-)
G36582 NA non-coding downstream 1212362 40335143 ~ 40335556 (-)
G36699 NA non-coding upstream 165780 41729164 ~ 41729412 (-)
G36710 NA non-coding upstream 386729 41950113 ~ 41950329 (-)
G36722 NA non-coding upstream 474151 42037535 ~ 42037735 (-)
G36787 NA non-coding upstream 889281 42452665 ~ 42452940 (-)
G36805 NA non-coding upstream 959779 42523163 ~ 42528691 (-)
AMCG00019731 NA other downstream 1423931 39970175 ~ 40123987 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other downstream 2042356 39416887 ~ 39505562 (-)
AMCG00019698 NA other downstream 3437694 37889444 ~ 38110224 (-)
AMCG00019665 NA other downstream 5566382 35934796 ~ 35981536 (-)
G35867 NA other downstream 6492474 35055019 ~ 35055444 (-)
AMCG00019741 NA other upstream 507678 42071062 ~ 42078932 (-)
G36817 NA other upstream 980732 42544116 ~ 42544524 (-)
G36862 NA other upstream 1080940 42644324 ~ 42656393 (-)
G36982 NA other upstream 1734847 43298231 ~ 43360906 (-)
AMCG00019761 NA other upstream 1766905 43330289 ~ 43342706 (-)

Expression


Co-expression Network