AMCG00019740


Basic Information

Item Value
gene id AMCG00019740
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 41691571 ~ 41866477 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019740
ATGCTAGAGTTCAGAGttCAGGATCCCACAGATGTCATACACAGATACAAGAAGATCGTGTGtacatacaagaaaataaaagtcaTGACAAAAGCTCTCCGTCGTCACAAGTTGGATAGAAACACTATGGTGTCAACAGCCCCAATAGCAGAGCTTGCCATTGCAGCTCCTGAGAAGTACAAAGAAGCAGTCTATGCCCTCCTCATGAAGACTTCTCGACTTGCGGCGGACAGACTGGCAGGCAGAGACAGTGGAGaggtcccgaccCCGGCCGCGCCCGCTGCCGAATCTAAGATCCCGaagaaattgaaaagaaaaaagaaaaaagtaccTGCTCTAgtcgccgaaccagaggtcccgatcccggccgccgccgaaccagaggtccagAACCAGGTCCCGATTCTagccgccgccgaaccagaggtcccgatccagATCCCGATCCGGGCCGTCGTTGCCGacccagaggtcccgatcccggaCGTCGTTGCCGACCCAGAGGTCCCGATTCCGGTCCTGATCCTGGCCTCCGCTCCCGAATCAGAGGTCCCGATCCCAACAGCCGCCGCCCAACCCGAGTTCCCAGCGGTCGCCGCCTTCATCGCTGCCGCCCAGCCCGAATGCCCAGCGGGTGAATCATCTTCGAGTGACACTGAAGACATCAGGCCTTCAGAGTTTGGTCGGTGGAAAGTCATTCTTTTGCAGGCCGAAGAACCTCGGAGAACACTGGCATCATCCATGATGAAGCTCACTTCTGCGGCACACAGAGAGtCAACAAGAGGCATCAGGCTGCTGAGCTCTGTCTACATATACACAAGGGATGTTAGTCCATGTTTCTCCGGGAGCCAAAAGCAAGGAGGAAGCCGGGGGACACCCAGGCTGGAGACCACTACTTGTGGACATGACAGCGaccCTCAACAGTTCAGTTACCTCATAGTGAACATTGACAACACTATGTCAGCCACCATGGGACACGGAACCCCATTCACACGGAGCCACAATGGACAGATCCACACGAACTTCGAGAGAGGACTTGCGAGAGTTGACAGATCAGGGAGAGTGCCCTGGGTGGCCCACTGGGCCGGTAAGATGACTGGGCGTTGGTCCGGACCGGAGAGGAGGGTTCGGTTGGAGACGCCACCACGATTGGAAGAGTATGCTGTTGCCGGGCAGGGATGGCTTGGTGCCAGCAAGGGGTTTCCAGTACAGACCCTTTTTCAAGGTAAACTCATTCTTGAGTTCACAATGcccttgcccttgcccttgcccttgcccttgcccttgcccttgcccttgccctCCAATGCTGCCAATGTTTCTTTCAGTTGCAAATCCAGTGTGAGGTCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019740 True 1353 mRNA 0.56 12 41691571 41866477

Neighbor

gene id symbol gene type direction distance location
AMCG00019736 cdh7,LOC108432272,LOC107584702,LOC107729377 coding upstream 333356 41348441 ~ 41358215 (+)
AMCG00019735 cdh7,LOC107584702,LOC108432272 coding upstream 356368 41324694 ~ 41335203 (+)
AMCG00019737 LOC107674380 coding upstream 378658 41304834 ~ 41312913 (+)
AMCG00019732 NA coding upstream 961905 40718483 ~ 40729666 (+)
AMCG00019733 NA coding upstream 988649 40691516 ~ 40702922 (+)
AMCG00019742 NA coding downstream 507991 42374468 ~ 42385648 (+)
AMCG00019745 prpf4b,LOC106597319,LOC107670278 coding downstream 642125 42508602 ~ 42527208 (+)
AMCG00019746 NA coding downstream 678970 42545447 ~ 42552673 (+)
AMCG00019750 NA coding downstream 788170 42654647 ~ 42662493 (+)
AMCG00019753 NA coding downstream 851456 42717933 ~ 42740339 (+)
G36654 LOC100846954 non-coding upstream 548997 41142190 ~ 41142574 (+)
G36644 NA non-coding upstream 820256 40871108 ~ 40871315 (+)
G36604 NA non-coding upstream 1044884 40646448 ~ 40646687 (+)
G36601 NA non-coding upstream 1111476 40579888 ~ 40580095 (+)
G36598 NA non-coding upstream 1201456 40489916 ~ 40490115 (+)
G36709 NA non-coding downstream 83648 41950125 ~ 41950350 (+)
G36716 NA non-coding downstream 166538 42033015 ~ 42033516 (+)
G36720 NA non-coding downstream 170682 42037159 ~ 42037370 (+)
G36744 NA non-coding downstream 347709 42214186 ~ 42270922 (+)
G36754 NA non-coding downstream 445071 42311548 ~ 42312172 (+)
AMCG00019708 vps41,LOC102790284 other upstream 3059393 38578316 ~ 38632178 (+)
G36212 NA other upstream 4175544 37513987 ~ 37516027 (+)
AMCG00019676 NA other upstream 4478052 37178359 ~ 37213519 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other upstream 5392024 36292346 ~ 36299547 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other upstream 5627721 36046477 ~ 36063850 (+)
AMCG00019747 tubb6,LOC108431516,LOC100711323,LOC107688430 other downstream 690063 42556540 ~ 42572080 (+)
AMCG00019751 NA other downstream 758253 42624730 ~ 42627105 (+)
AMCG00019755 NA other downstream 1094179 42960656 ~ 42962658 (+)
AMCG00019758 NA other downstream 1395417 43261894 ~ 43271192 (+)
G36954 NA other downstream 1463815 43330292 ~ 43333313 (+)

Expression


Co-expression Network