AMCG00019743 (tmx3,zgc:152808)


Basic Information

Item Value
gene id AMCG00019743
gene name tmx3,zgc:152808
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 42388980 ~ 42406310 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019743
TTCTACGCTCCTTGGTGTGGACACTGTAAAAAGCTGGAGCCCGTGTGGCAAGATGTTGGCGCAGAAATGAGAAGTTCAGGGTCACCCGTGAGAGTGGGGAAGATGGATGCTACGGCCTATTCCAGTGTTGCATCTGAATTTGGTGTGCGCGGATATCCCACTATAAAACtGTTAAAGGGGGACATGGCGTACAATTACAAAGGGCCCAGGACCAAAGATGACATTGTTGAATTTGCCAACAGGGTAGCCGGGCCTCTGGTCCGCCCCCTTCCCAGCCAGCAGATGTTTGAACACGTCCTTAAGAGACACGATGTGCTCTTCGTTTACATCGGAGGTGAATCTCCCCTCAAGGAAAAATACATCGAAGTGGCCTCAGAGCTGATCGTGTACACGTACTTCTTCTCTGCTTCTGAAGACGTTTTGCCAAAGGTATGTGTCTCTACAGGGTATTAG

Function

symbol description
tmx3 Enables protein-disulfide reductase activity. Involved in peptidyl-cysteine oxidation. Located in cell surface and endoplasmic reticulum membrane.

NR:

description
PREDICTED: protein disulfide-isomerase TMX3

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0006662 glycerol ether metabolic process biological_process
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG:

id description
K09585 TXNDC10; thioredoxin domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019743 True 453 mRNA 0.50 5 42388980 42406310

Neighbor

gene id symbol gene type direction distance location
AMCG00019739 NA coding downstream 812675 41574276 ~ 41576305 (-)
AMCG00019738 NA coding downstream 825596 41547918 ~ 41563384 (-)
AMCG00019734 NA coding downstream 1622792 40729693 ~ 40766188 (-)
AMCG00019726 idi1,LOC107713854 coding downstream 2558393 39826355 ~ 39830587 (-)
AMCG00019727 larp4b,LOC106599484 coding downstream 2648737 39733389 ~ 39740243 (-)
AMCG00019744 NA coding upstream 8300 42414610 ~ 42442771 (-)
AMCG00019748 NA coding upstream 85754 42492064 ~ 42507976 (-)
AMCG00019749 NA coding upstream 127594 42533904 ~ 42542454 (-)
AMCG00019752 afg3l2,LOC107589831,LOC107689395 coding upstream 155259 42561569 ~ 42580384 (-)
AMCG00019754 NA coding upstream 289519 42695829 ~ 42715610 (-)
G36722 NA non-coding downstream 351245 42037535 ~ 42037735 (-)
G36710 NA non-coding downstream 438651 41950113 ~ 41950329 (-)
G36699 NA non-coding downstream 659568 41729164 ~ 41729412 (-)
G36652 NA non-coding downstream 1378577 41010200 ~ 41010403 (-)
G36650 NA non-coding downstream 1386303 41002062 ~ 41002677 (-)
G36787 NA non-coding upstream 46355 42452665 ~ 42452940 (-)
G36805 NA non-coding upstream 116853 42523163 ~ 42528691 (-)
G36841 NA non-coding upstream 175833 42582143 ~ 42582473 (-)
G36882 NA non-coding upstream 356221 42762531 ~ 42762734 (-)
G36894 NA non-coding upstream 442147 42848457 ~ 42848686 (-)
AMCG00019741 NA other downstream 310048 42071062 ~ 42078932 (-)
AMCG00019731 NA other downstream 2264993 39970175 ~ 40123987 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other downstream 2883418 39416887 ~ 39505562 (-)
AMCG00019698 NA other downstream 4278756 37889444 ~ 38110224 (-)
AMCG00019665 NA other downstream 6407444 35934796 ~ 35981536 (-)
G36817 NA other upstream 137806 42544116 ~ 42544524 (-)
G36862 NA other upstream 238014 42644324 ~ 42656393 (-)
G36982 NA other upstream 891921 43298231 ~ 43360906 (-)
AMCG00019761 NA other upstream 923979 43330289 ~ 43342706 (-)
AMCG00019768 NA other upstream 1170999 43577309 ~ 43713777 (-)

Expression


Co-expression Network