AMCG00019746


Basic Information

Item Value
gene id AMCG00019746
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 42545447 ~ 42552673 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019746
CTTACTCAAAAGAAATACTCATAACAATGTCGTGACACATCCCAGGGGCTGCAGGCGTCTAGTGTCGGGCTGAGAGCTGAGGCCGAGCCCAGTCCGCGCAGCCGCAATGGAGTACGCCAGCGCCCTGTCGCCGCGCTCTCTGCTCAGGTCTGTGTCATCGGTCAGCTCCTCGCTCAGCAAACGTGTGCTCTTTCAGCATGAAGCCAGGCCCCGGCCATTCAGGGTCTGCTCCCACGACCGGCTCAGACGCACCGGAGTGGTGGCCACGACGCTGGATGATCTCCTCGCTAAGGCTGCCAACGCGCTCCGGTTGACGTCTGCCACGTTGTCTCTGGTTGTGGACGAAGATGGGACTATGGTTGAGAGTGAGGATTTCTTCCAGTCCCTGGAGACCAACATGCAGTTAATGCTGCTGGAGGATGGGCAAAGATGGACGCCAGTCAAGAAAAGTGGAATTGCCAAATTCACCTTTGACCTGTATAAGCTGAATCCTAAGGATTTCATTGGATGTCTTACCGTTAAAGCCACGTTTTATGAGATGTACTCCATGTCGTATGACTTTAAATGTACAGGAGCAAAGAGTGTGCTGAAAAAAGTGCTCCACTACTTCTCCTGTCTGGCCCAGGTGACGGGCCACTTCCTCCTGTACACCTCCTCCTATGTGCTGCAGTGTATCGGAGAAGAGGAGCAGACGGCCCCAGAGTAGCTTCCAGCTGTATTATCAATAGTTGTTCTCCGTGGACAGTTAGTTGCTCACAGAAGCAGTTGCTTGCAGTGACTCGCAGAAGTCCTGTTCAGTACTGGCTCAATGAATGTACTCACCCTGTTGCCTCTGTAGTGAAAAGCGGACTTCATCTCATTTGCTTTGTGAATAAATGTGCTTTCAGGTTGgccacaatgttaaaaaaaaaaaaaaaaagtttgtaatgTGCctcagatttaaataataataataatcataaaatatgaTCTGAAGACCACTGCATGCAGGCTAACACTTATTCTCCATAAGGAAAACTGCTCCTGCCCAGGAGAACTGTGATTATTCTTTGCTTGCTTTATGATGGCACAGACCGCACACACAAGTTGCACAAACGAATCAGAGCAGTGAACAGTTCTATAGGATAAGTGCTGCATATCTGAAACTTGGGAGTGCCGTGGATGTGATTTTTGCTCGTTCTTTGGGTGAAATTTGTTCCCCTGTTGAAGACTGACACATGTACATGTTCATATATCAGGAACCAACTGAGCTGCAGAATGtggaataaaacacacaaatgcacacttCAACAATGGAAAACAGCTGCTGGTTTTAACCCACTGTCTGTCAGTGCAAGTTCATTTTCCCTAGCACTGAATCGGGATGGGGAAACAGCCTACGGGTTACATAATCAAAGTGAGAAATTGCTAATGGAGGTATGTGGCTTTGATCCACTGGATTCAGTATACACTCCTGACAAAATATGGCACCTCTCGAGTAAGCTAAGTGCAGTTCTCACTGAGTCACAGAGAAACCACCTCACTTAAAGGATCAAAGGGCCACTGCTCCCTTGATGGCTGGTTTAAAGAAACGGATTTAGAGATTAAGCACGTTTTTCCGAGTTAAGATTAAGCGTACACGCTGTCGTGCTCATTTGAGTTTCTCTAGCAGCAG

Function

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process
GO:0005811 lipid droplet cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019746 True 1654 mRNA 0.47 5 42545447 42552673

Neighbor

gene id symbol gene type direction distance location
AMCG00019745 prpf4b,LOC106597319,LOC107670278 coding upstream 18239 42508602 ~ 42527208 (+)
AMCG00019742 NA coding upstream 159799 42374468 ~ 42385648 (+)
AMCG00019740 NA coding upstream 678970 41691571 ~ 41866477 (+)
AMCG00019736 cdh7,LOC108432272,LOC107584702,LOC107729377 coding upstream 1187232 41348441 ~ 41358215 (+)
AMCG00019735 cdh7,LOC107584702,LOC108432272 coding upstream 1210244 41324694 ~ 41335203 (+)
AMCG00019750 NA coding downstream 101974 42654647 ~ 42662493 (+)
AMCG00019753 NA coding downstream 165260 42717933 ~ 42740339 (+)
AMCG00019762 NA coding downstream 746405 43299078 ~ 43302976 (+)
AMCG00019759 NA coding downstream 810328 43363001 ~ 43368277 (+)
AMCG00019764 cdyl,LOC107689409 coding downstream 974774 43527447 ~ 43552305 (+)
G36816 NA non-coding upstream 921 42544225 ~ 42544526 (+)
G36807 NA non-coding upstream 12738 42532017 ~ 42532709 (+)
G36754 NA non-coding upstream 233275 42311548 ~ 42312172 (+)
G36744 NA non-coding upstream 274525 42214186 ~ 42270922 (+)
G36720 NA non-coding upstream 508077 42037159 ~ 42037370 (+)
G36842 NA non-coding downstream 29847 42582520 ~ 42582758 (+)
G36844 NA non-coding downstream 32185 42584858 ~ 42585152 (+)
G36845 NA non-coding downstream 50136 42602809 ~ 42603022 (+)
G36895 NA non-coding downstream 315729 42868402 ~ 42868634 (+)
G36910 NA non-coding downstream 397533 42950206 ~ 42950422 (+)
AMCG00019708 vps41,LOC102790284 other upstream 3913269 38578316 ~ 38632178 (+)
G36212 NA other upstream 5029420 37513987 ~ 37516027 (+)
AMCG00019676 NA other upstream 5331928 37178359 ~ 37213519 (+)
AMCG00019671 adcyap1,paca,LOC106578701 other upstream 6245900 36292346 ~ 36299547 (+)
AMCG00019662 hacd1,LOC105890814,LOC106590135,LOC106578705 other upstream 6481597 36046477 ~ 36063850 (+)
AMCG00019747 tubb6,LOC108431516,LOC100711323,LOC107688430 other downstream 3867 42556540 ~ 42572080 (+)
AMCG00019751 NA other downstream 72057 42624730 ~ 42627105 (+)
AMCG00019755 NA other downstream 407983 42960656 ~ 42962658 (+)
AMCG00019758 NA other downstream 709221 43261894 ~ 43271192 (+)
G36954 NA other downstream 777619 43330292 ~ 43333313 (+)

Expression


Co-expression Network