AMCG00019748


Basic Information

Item Value
gene id AMCG00019748
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 42492064 ~ 42507976 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019748
CTTTTACTACTTCCTGGAAGTAGTAAATATGGTCTTCTGTGAATTTCTAATCAATTATAcgatattatattttctttaaaaccacCAACGACAAATCAGTAAGGTTAGTTGGACGGCTAATACTGCTATTAACACTTCGATAAAAGtTGTCCCTCTTCTCTGAATGCAGAGTGACGATGAGCCAGTTGAAATATGTCTACCAGGACATCCAACCAGTGACTCTTCACATCCCTGAGGAGAGCACCACCTCCAGGCTGTACTCCAGCATGGTGGAAGGGGTTGGAGGGCAGGTCTCTGGGCTTGTGGAAATGTTCCTTGTGGAGGTTTACCGCTGCCGAGTCTGCCAGTTCACCAGCAGCCAGAAGAGCAAGATCAGCGCCCATGTGATAAACCGGCACGAGCTGGGGAGGACGTGTCACCCTCTGACTTGCCTGGAGAAGGATGAGGTGGGTcaacaggaagaggaggagctggATCGGGACTCCGTCTATGGTATGGAGGACCAACTGCATCCAGATGGCAAAGACAACGATGACCACATGGACGTGGGCCTGGAACGAGTGTCCTTCCTGCTGCCCATGTATGGCATGCTGCACAACATCAGCCCCCAGTCATGTGACATGAGCCTCAGCACCAACAGCGATGGCCTCCATGTAGCCCACACCTGCGAGGTGACCACTCTGTTTGAGGAAGGGGAAGAGGCAAGTCAGTTCCGATTGGAGGATCCTGGTTCTCTGTCATGTCCAATGGGCTCGGCCGCCGACTGCACCAGCGAGGACCAGGATGATGAGATGGCCCAGTCGGCTCACCTCATGTCCCTGGGACTGTGTAGGATCTCCAGCATGAAAGCCCAACCCATGAACCCGGAGTCAGGGAGGGCCCCAGAGGCAACAGACAGCCAACCCCCAGAAAAGAGAGCTCCCTCCCCACTCCCAGGCTTCCAGAAGAACTCAGACCACCAGGAGACCCTTTTGTGTCACAATCTGGACCTGGCCTCCAAAACTCTGCTGGAGGTGCCGCAGAAAGACCACGAAGTAGCACAGGGCTCCAGGGCCCTACCGGGCGACCACTCTGCATCAGAGTGGAGGCCGACAGAGAGGCCTGCTCAGGGGCAAGCTAGGGAGTGCAGGGCCCACCTGTGCGAAGTGTGCCAGAGGCAGTTCAAGAGCGTTAAGTCCCGGGACCACCACCAGAGGAGACACGGGAAGGAGCTACCGGTGGCCCAGTATAAATCGTGGAAGAAAGTCTACAAGCATCTGACATCTCAGCATCCGCCAGACGAAGAGGTGGACAAAGACCCTGAATGTGACAAGGGATTTAGCCGAATACACCAATCAACAAGCAACACGAGATTGGCCACTCAGAGCCGTCCTGGCTGTTTGAAGCGGCTCCTGTGTGGGGAGCAGTTCCGGAGCTGGCCAGATGGGGAGCTGCACGGCGAAGCCCGaaagatgaaaaggaaaaagaagaggAAGGCTCAGAGGTCATCACAGGTCCAGCATGGCAGGGGCAGCGCAGTGCagacagagcaagagagaacCAGCAGcaacaggaggaggagggcagggAAGGAGTTCCCGTGCTCGCAGTGTGGCAGGAAGTTCTCCTCCAGGCTGGCCCTGCGCAGACATATGGGGATCCACAGTGGGGTGAAACCGTTTGAGTGTGAAGACTGTGACTACAAGACCAGGTTGAAGGCCTCGCTCATACAGCACATGCGAGTTCACACAGgtgAGAAACCATTCAAGTGCAGCCAGTGTTCGTACGCCTCCATCGATGGCAGCTCCCTGAGGAGGCACTCCAGGATACACACCCGTGAGAAGCCCCACCACATTCAGAAGAAGAGCCTGGACCTGCACGTGCGCAGACACCACACTGGGGAGGCCTTCTTCTGCCACCTCTGCCCTTATTCCTCCCCGGACAAGCAGCTGGTCCACAGGCATGTTAAGAGGCACCACTCTGGCCTTGCAGGCAGTGCCAAGCCCCCcactgccctctctctccaggcagACCAGTCCTCAGAGAGCTCCTGACCTCTGTGGGCCACTCACTCCCGCGCGCCTCTTGTCGAGATTGGAAACGGCCCTGTAAGACTGTATCCCCCATAGGCTGAGAATGTAGCACGATCCGCAGCCAGAATGATGCCCTTCCTTTCTCAATGGATGCTGTCACAGCTGCTcgaaatactttatttattcaaaaacattttaggaATCCAAAAATGTTGaatacactatttatttatgtatgtatgtatgtatgtatgtatgtattgatttcatGAAACCCCCCCAATTGTGTGGCCATGGCACCAACAGCATGTGGTCCTGATGTAGCTCTCACTTGTAACACTTTGGGCTCACAGAGACCTGGTAGCCACACCCAGCTAACCACATAccattgtggcaacgttgtaATAAAGTGAGCTAAGAAACAGTATACTGAGAAATAGTATTCATAGAGTATGAAAAGATtattcaaaacaatcaaaacagtCAAAACAGTTGAGCTGTGCCTTCAGAAATTCCAGAGATGAAATGTGCAGAGAGAACAGAGAAAATTAATGACACCGTGATCTCAGGggtaatacatttctaaaaaatatttttctcacaTCATAGTTGTAAAATCCAAAACAGCCAAGCTTCAACCTCACACAACATTTCCGGAAGTATATAGCTTCGCAGTGATGACTCTGAGAACCCTGGCCAGGTTAAGCTCACCCGGCTTCAGAGGAGCTTGGGCAATTATGGGCGACCTTGGGTGAATTTCATGTCATCGTCGGTGGCGAGACAGTCCAGACTGGACCAGCGCTGACTGGAATATATGGCTCAGCCAGCAAGCAGAAGTTCTTACAGTTTGAGACACTCAGGAGCCTGAGAGCAGAGTTTTAATGGTTAAAAAGTTCAAAAGGAGTGGCTTACCAGTTAAGCCAAACACGGAGTCCAGAACAccttcttgtctgtgattggctagcTCAGAGCCTGAGTTGTACAAGATTTTCATACCGTCTTATAAATCAGCGAGAAGCTGGAACAGAGCTGCTGATGCGTGCTGTTTTTCAATCACTGGTTTTCTCACAGGCAGATAGGTATAAGCTGTTGTCATGGGCTAAAAATGTTATCAAGGAGGGAGGgcataaaaagacaaaaggctTTGTTGCATTGTTATACAGTTTTATCAGTCAATTTAaagatattcatatttgtatatgaCCATCTTGAAAGCAATATGAAGATTTAGCTGTGTATTTGATGCTTTATTAAAGTCCATTTAGCTATCGATGTGCCGTTTTTCTGCTTATGAAAATGCAGAGCTGGTTTGCTTGTCTTTAGCCCTAGGAGGGGGAAATTGGCAAGGAAGTCAAAGGCTGTGGAACCTGCTTTGTACAAATATAGATAAACACTATACTGGTAAGAAGCTGGCAGAAATCTGGAGCTCAGACAAGCTTGGCAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019748 True 3460 mRNA 0.50 8 42492064 42507976

Neighbor

gene id symbol gene type direction distance location
AMCG00019744 NA coding downstream 49293 42414610 ~ 42442771 (-)
AMCG00019743 tmx3,zgc:152808 coding downstream 85754 42388980 ~ 42406310 (-)
AMCG00019739 NA coding downstream 915759 41574276 ~ 41576305 (-)
AMCG00019738 NA coding downstream 928680 41547918 ~ 41563384 (-)
AMCG00019734 NA coding downstream 1725876 40729693 ~ 40766188 (-)
AMCG00019749 NA coding upstream 25928 42533904 ~ 42542454 (-)
AMCG00019752 afg3l2,LOC107589831,LOC107689395 coding upstream 53593 42561569 ~ 42580384 (-)
AMCG00019754 NA coding upstream 187853 42695829 ~ 42715610 (-)
AMCG00019756 NA coding upstream 467392 42975368 ~ 42976338 (-)
AMCG00019757 myrip coding upstream 510133 43018109 ~ 43151658 (-)
G36787 NA non-coding downstream 39124 42452665 ~ 42452940 (-)
G36722 NA non-coding downstream 454329 42037535 ~ 42037735 (-)
G36710 NA non-coding downstream 541735 41950113 ~ 41950329 (-)
G36699 NA non-coding downstream 762652 41729164 ~ 41729412 (-)
G36652 NA non-coding downstream 1481661 41010200 ~ 41010403 (-)
G36805 NA non-coding upstream 15187 42523163 ~ 42528691 (-)
G36841 NA non-coding upstream 74167 42582143 ~ 42582473 (-)
G36882 NA non-coding upstream 254555 42762531 ~ 42762734 (-)
G36894 NA non-coding upstream 340481 42848457 ~ 42848686 (-)
G36907 NA non-coding upstream 434266 42942242 ~ 42942499 (-)
AMCG00019741 NA other downstream 413132 42071062 ~ 42078932 (-)
AMCG00019731 NA other downstream 2368077 39970175 ~ 40123987 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other downstream 2986502 39416887 ~ 39505562 (-)
AMCG00019698 NA other downstream 4381840 37889444 ~ 38110224 (-)
AMCG00019665 NA other downstream 6510528 35934796 ~ 35981536 (-)
G36817 NA other upstream 36140 42544116 ~ 42544524 (-)
G36862 NA other upstream 136348 42644324 ~ 42656393 (-)
G36982 NA other upstream 790255 43298231 ~ 43360906 (-)
AMCG00019761 NA other upstream 822313 43330289 ~ 43342706 (-)
AMCG00019768 NA other upstream 1069333 43577309 ~ 43713777 (-)

Expression


Co-expression Network