Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00019750 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 42654647 ~ 42662493 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00019750 | True | 1152 | mRNA | 0.53 | 4 | 42654647 | 42662493 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019746 | NA | coding | upstream | 101974 | 42545447 ~ 42552673 (+) |
| AMCG00019745 | prpf4b,LOC106597319,LOC107670278 | coding | upstream | 127439 | 42508602 ~ 42527208 (+) |
| AMCG00019742 | NA | coding | upstream | 268999 | 42374468 ~ 42385648 (+) |
| AMCG00019740 | NA | coding | upstream | 788170 | 41691571 ~ 41866477 (+) |
| AMCG00019736 | cdh7,LOC108432272,LOC107584702,LOC107729377 | coding | upstream | 1296432 | 41348441 ~ 41358215 (+) |
| AMCG00019753 | NA | coding | downstream | 55440 | 42717933 ~ 42740339 (+) |
| AMCG00019762 | NA | coding | downstream | 636585 | 43299078 ~ 43302976 (+) |
| AMCG00019759 | NA | coding | downstream | 700508 | 43363001 ~ 43368277 (+) |
| AMCG00019764 | cdyl,LOC107689409 | coding | downstream | 864954 | 43527447 ~ 43552305 (+) |
| AMCG00019766 | NA | coding | downstream | 902593 | 43565086 ~ 43566039 (+) |
| G36845 | NA | non-coding | upstream | 51625 | 42602809 ~ 42603022 (+) |
| G36844 | NA | non-coding | upstream | 69495 | 42584858 ~ 42585152 (+) |
| G36842 | NA | non-coding | upstream | 71889 | 42582520 ~ 42582758 (+) |
| G36816 | NA | non-coding | upstream | 110121 | 42544225 ~ 42544526 (+) |
| G36807 | NA | non-coding | upstream | 121938 | 42532017 ~ 42532709 (+) |
| G36895 | NA | non-coding | downstream | 205909 | 42868402 ~ 42868634 (+) |
| G36910 | NA | non-coding | downstream | 287713 | 42950206 ~ 42950422 (+) |
| G36936 | NA | non-coding | downstream | 569863 | 43232356 ~ 43232646 (+) |
| G37000 | NA | non-coding | downstream | 796953 | 43459446 ~ 43550548 (+) |
| G37011 | NA | non-coding | downstream | 913755 | 43576248 ~ 43577257 (+) |
| AMCG00019751 | NA | other | upstream | 27542 | 42624730 ~ 42627105 (+) |
| AMCG00019747 | tubb6,LOC108431516,LOC100711323,LOC107688430 | other | upstream | 82567 | 42556540 ~ 42572080 (+) |
| AMCG00019708 | vps41,LOC102790284 | other | upstream | 4022469 | 38578316 ~ 38632178 (+) |
| G36212 | NA | other | upstream | 5138620 | 37513987 ~ 37516027 (+) |
| AMCG00019676 | NA | other | upstream | 5441128 | 37178359 ~ 37213519 (+) |
| AMCG00019755 | NA | other | downstream | 298163 | 42960656 ~ 42962658 (+) |
| AMCG00019758 | NA | other | downstream | 599401 | 43261894 ~ 43271192 (+) |
| G36954 | NA | other | downstream | 667799 | 43330292 ~ 43333313 (+) |
| G37105 | ssr1 | other | downstream | 1390581 | 44053074 ~ 44056603 (+) |
| AMCG00019785 | NA | other | downstream | 1773429 | 44435922 ~ 44443756 (+) |
