AMCG00019753


Basic Information

Item Value
gene id AMCG00019753
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 42717933 ~ 42740339 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019753
atgggagaaaaaaacCAAAGCGACAAGCAAGTGCCTTACTACCGTTTAAAGGAAGTGGAGGAGCACAATTCTTCCAAGAGCACCTGGATTATTCTTCACCATAAGATTTACGACGTCACTAAATTTCTCGAAGAGCACCCAGGCGGGGAGGAGGTGCTGCGGGAACAGGCCGGGGGTGATGCCACAGAAAGCTTTGAAGATGTCGGCCATTCCACAGATGCCAAGACATTGACCAACAACTATGTCATAGGGGAAGTACATCCGGAAGACCGGCCTAAACTCCAGAAGCCACCAGAATCACTTGTAACTCCAGTAAATGAGAACTCAAGCTGGTGGACAAACTGGGTGATCCCTGCCCTCACTGCTGCCCTGGTCACGGCCCTGTACCGCTTCTACATGGCTGAGGAGTAGACGCTCACAGCATGTTGGCTGCTGTGTAACCACTGCTATTGATCACTGTAATACTGTAGCTGCCTATTTTAGATCCAGCCAGCTCAGCTTTTATAGTACAAAACttttaaagtacaaaaatattatCGTACCACTTTGATTCAGGTTTTTCATcctataatatatatgaaggCATTATTTTTCCTTAGAGATTGCAAAtactcattatatatatatatatataatatatatatatattaaaatttaGATTGTGCCTTTAGGCTAGTTCTTATTCACactgtaatttatgtaaaaaatacaattatattaagaCTCTAATTTGTACACCAATACGGAGCCTGCACCAATATCATTCCGTAGTTTAGCACTGTTTGAAGATGTAACCAAAGACTGTGATGAATAGGTTACCCAGCTTGGTGCGTTATAATTTCCCATCCTGCCACGTTACTGTAATACTTAGTTttgttctaaaataataaactgtgattttaattggtca

Function

GO:

id name namespace
GO:0071466 cellular response to xenobiotic stimulus biological_process
GO:0046872 metal ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K23490 CYB5; cytochrome b5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019753 True 910 mRNA 0.40 5 42717933 42740339

Neighbor

gene id symbol gene type direction distance location
AMCG00019750 NA coding upstream 55440 42654647 ~ 42662493 (+)
AMCG00019746 NA coding upstream 165260 42545447 ~ 42552673 (+)
AMCG00019745 prpf4b,LOC106597319,LOC107670278 coding upstream 190725 42508602 ~ 42527208 (+)
AMCG00019742 NA coding upstream 332285 42374468 ~ 42385648 (+)
AMCG00019740 NA coding upstream 851456 41691571 ~ 41866477 (+)
AMCG00019762 NA coding downstream 558739 43299078 ~ 43302976 (+)
AMCG00019759 NA coding downstream 622662 43363001 ~ 43368277 (+)
AMCG00019764 cdyl,LOC107689409 coding downstream 787108 43527447 ~ 43552305 (+)
AMCG00019766 NA coding downstream 824747 43565086 ~ 43566039 (+)
AMCG00019767 fars2,LOC103399687 coding downstream 962204 43702543 ~ 43705085 (+)
G36845 NA non-coding upstream 114911 42602809 ~ 42603022 (+)
G36844 NA non-coding upstream 132781 42584858 ~ 42585152 (+)
G36842 NA non-coding upstream 135175 42582520 ~ 42582758 (+)
G36816 NA non-coding upstream 173407 42544225 ~ 42544526 (+)
G36807 NA non-coding upstream 185224 42532017 ~ 42532709 (+)
G36895 NA non-coding downstream 128063 42868402 ~ 42868634 (+)
G36910 NA non-coding downstream 209867 42950206 ~ 42950422 (+)
G36936 NA non-coding downstream 492017 43232356 ~ 43232646 (+)
G37000 NA non-coding downstream 719107 43459446 ~ 43550548 (+)
G37011 NA non-coding downstream 835909 43576248 ~ 43577257 (+)
AMCG00019751 NA other upstream 90828 42624730 ~ 42627105 (+)
AMCG00019747 tubb6,LOC108431516,LOC100711323,LOC107688430 other upstream 145853 42556540 ~ 42572080 (+)
AMCG00019708 vps41,LOC102790284 other upstream 4085755 38578316 ~ 38632178 (+)
G36212 NA other upstream 5201906 37513987 ~ 37516027 (+)
AMCG00019676 NA other upstream 5504414 37178359 ~ 37213519 (+)
AMCG00019755 NA other downstream 220317 42960656 ~ 42962658 (+)
AMCG00019758 NA other downstream 521555 43261894 ~ 43271192 (+)
G36954 NA other downstream 589953 43330292 ~ 43333313 (+)
G37105 ssr1 other downstream 1312735 44053074 ~ 44056603 (+)
AMCG00019785 NA other downstream 1695583 44435922 ~ 44443756 (+)

Expression


Co-expression Network