AMCG00019760 (acad11)


Basic Information

Item Value
gene id AMCG00019760
gene name acad11
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 43274030 ~ 43282805 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019760
ATGTTTTTCAGacacaaacagcacagcatGATTCTTGTCCCACTGGACACTCAAGGTGTAAAGATTATCCGACCTTTGACAGTGTTTGGACAGGATGATGCCAGTCACGGTGGACACTTCGAGGTTCATTTTGATAATGTATGTGTCCCCCTATCCAACATTCTTGTAGGTGAAGGTCGAGGGTTTGAGATCGCACAGGGCCGGCTGGGACCCGGGAGACTCCATCATTGCATGAGGGCCGTCGGCCTGGCAGAGCGTGCCCTGGAGCTGCTGTGTCGGCGGGCAGCCACCCGACAGACCTTTGGGAAGAAGCTCTACAAACATGAGGTGGTTGCCCACTGGATAGCAGAGTGTCGGATTGCCATTGACCAGTCCCGCCTGCTGACTCTCAGTGCAGCCAATGCCATCGACGTGCTGGGGAGTGCCACTGCGAGAAAGCAGATTGCGATGATAAAAGTCACTGCAGCGAGGATGGCCTGCAAAGTGGTGGACTGCGCCATCCAAGTCTTCGGAGGGGCTGGCGTGTCTGGGGACTTCCCTCTGGCCCAGATGTATTCTGCGGTTCGGACTTTGCGCATCGCAGATGGTCCAGACGAGGTCCACCTGTCATCCATCGCTTATATGGAACTGAGGGACCAGCTGCAGATGTCCACGGCCAAGCTGTGA

Function

symbol description
acad11 Predicted to enable flavin adenine dinucleotide binding activity and oxidoreductase activity, acting on the CH-CH group of donors. Predicted to be active in mitochondrion. Is expressed in epidermis; intestinal bulb; and liver. Orthologous to human ACAD11 (acyl-CoA dehydrogenase family member 11).

NR:

description
acyl-CoA dehydrogenase family member 11

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0003995 acyl-CoA dehydrogenase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019760 True 666 mRNA 0.56 6 43274030 43282805

Neighbor

gene id symbol gene type direction distance location
AMCG00019757 myrip coding downstream 122372 43018109 ~ 43151658 (-)
AMCG00019756 NA coding downstream 297692 42975368 ~ 42976338 (-)
AMCG00019754 NA coding downstream 558420 42695829 ~ 42715610 (-)
AMCG00019752 afg3l2,LOC107589831,LOC107689395 coding downstream 693646 42561569 ~ 42580384 (-)
AMCG00019749 NA coding downstream 731576 42533904 ~ 42542454 (-)
AMCG00019763 LOC102782841,LOC107589980 coding upstream 87091 43369896 ~ 43399130 (-)
AMCG00019765 NA coding upstream 274094 43556899 ~ 43563516 (-)
AMCG00019769 NA coding upstream 521355 43804160 ~ 43809705 (-)
AMCG00019771 nrn1,LOC106590090,LOC106578581,LOC107713755 coding upstream 592120 43874925 ~ 43877635 (-)
AMCG00019772 NA coding upstream 599743 43882548 ~ 43929432 (-)
G36907 NA non-coding downstream 331531 42942242 ~ 42942499 (-)
G36894 NA non-coding downstream 425344 42848457 ~ 42848686 (-)
G36882 NA non-coding downstream 511296 42762531 ~ 42762734 (-)
G36841 NA non-coding downstream 691557 42582143 ~ 42582473 (-)
G36805 NA non-coding downstream 745339 42523163 ~ 42528691 (-)
G37022 NA non-coding upstream 243602 43526407 ~ 43555509 (-)
G37021 NA non-coding upstream 272938 43555743 ~ 43556744 (-)
G37048 NA non-coding upstream 539529 43822334 ~ 43822820 (-)
G37171 NA non-coding upstream 1126412 44409217 ~ 44410259 (-)
G37174 NA non-coding upstream 1154115 44436920 ~ 44443701 (-)
G36862 NA other downstream 617637 42644324 ~ 42656393 (-)
G36817 NA other downstream 729506 42544116 ~ 42544524 (-)
AMCG00019741 NA other downstream 1195098 42071062 ~ 42078932 (-)
AMCG00019731 NA other downstream 3150043 39970175 ~ 40123987 (-)
AMCG00019724 dip2c,dip2ca,LOC106522911,LOC106532211 other downstream 3768468 39416887 ~ 39505562 (-)
G36982 NA other upstream 15426 43298231 ~ 43360906 (-)
AMCG00019761 NA other upstream 47484 43330289 ~ 43342706 (-)
AMCG00019768 NA other upstream 294504 43577309 ~ 43713777 (-)
AMCG00019799 NA other upstream 1613694 44896499 ~ 44910150 (-)
G37492 NA other upstream 3082533 46365338 ~ 46393098 (-)

Expression


Co-expression Network