AMCG00019765


Basic Information

Item Value
gene id AMCG00019765
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 43556899 ~ 43563516 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019765
attatgatgatgatgatgatgttgatgatgatgatgttgtattatcattattattactcataTTAACTTGCATACTATCATTAACCTGTGCAGCTACTAACCTTCTCACTTTGACATTCTATTACTGATGTAGTATAATTTATGTTAGGAGTAGTATATGCTTCTGCTTCAAATACAACCCAGCACTGGTATTAACCTACTACTACACAATAATGAATATCCAGTAAAAGCCTATATCATGCAAACtgctgtcacatgcagacagtATCTTCAGCTCCTCTGCTGGGTAAGGCCTTGCTGTGCGCTGGCAGGCCGGCAGTCGTGCTGTGTGGGCTCTGCAGGTGACTGATCTCTGTGGAGTTTCCTTGGGCCGCAGCCGCAGCCGCAGCGAGGTTggtgttgcgcagatttccgcagctCTGCTTCTGCCAGGAATGTGACGTAGACGGCACAAATACGTAAGCAGCCAAGCCCCCAGACCGCCCGCCGCGAAAGGGAAGTGACGTAAAGCGCTAGTGATGACTGATACACGCTATTGGTTGCACCAGCCAATCCGGAAGAGCTGCTGAATTACCTGCTGTGAGGAACTCATGGGTTTTCAGAAAGCAGTTTTTACAGTTGATTTGAGACAGCAGCGCATAATTGCACATTTCTTTATCCCCACCTGCATTTAACGATGTTCGCCAACCTGGAGAAATGTCCGAGGCACTTAGTGGTGTGCGAGAAATCAAACTTCACGAATGACAAGTCCAGGCATGGGACCCACGTGGCCGGGCACTATTTTAACTACAAGGTGTCCATTTTGATACCTGAATGTGGGTCGTTGCCCTCAGCACTGCAGAGCATTGTAAATGGCTTCACAAAGTATTATCTGGTGAGGGATTTCCCAGTGTTTGAGATGCTGGAAGAGGAGTTTCTGGAGAGACATGTGAAAAAGGGGAGTCTGTATGCTCTGTCCTATCGGACCCGAATAGACCAGGACAACACCATTGCCCTTCTCCCAACAGGGACCCTCGTCTTGTCTGTAGATAAAGACACTTATGAAGCGCTTGGTCTGGAGGGGCAGAAGTCACAATATAACCACAAGATGAGATATGTGATCTGCATCGATCTCACCGATAAGTCTTTGGCTCCGGGTTCAAAGAAGTACAAGCGTGTGCTCTGGGCCCTGAAGGAGAAGGTCCAGCTCAGAAGTGACTTTCTGATGGCGAAGCATGACAACGCGGGTAAAGACTTGGGTCTCTCAGCTGGCTGTGTTTCCGGTCACTTCATGCGCTCATACCAGTGCAAGGAGTACGCGCCCACTGTCTCCACACGCAGGCTGACGGACACGCTCTGTCCTGTCATTAACTCCAGGCACCTGAGAGGGGAGGCGGAGGAGTCCTGCGATTCCCAGGAGTTCTTGGAGTGGTTGGGGGCTGTCACAGCTGGCGTCATTGACTGCAACAACAAAGCATCCAGTTTCCTATCCACTTACTGCTGCCCGGAGCCGAGAACCGCCCTGGGACAGGCCTGTCTGAGCAGCGTGACCGGCTTCCTGCTTCCAGAGGACATTCACAAGCTCCTGGCAGAGCTACGGTGCTACTTCGACGAACCCAAGTTTGCATCCTGGTCGTCCCTGACGGTGCACGGCTTTGCAGACAGCCCGGTGTCGTGGGGCACGGCGGAGCACGGCTTCCACAAGGGTGGGGAAAACCTCTACAGCTTTGTCATCTTCAAAAACCAGGACTACTGGCTTCACATGGTCGCCGGGGCTCATGACGGCTGCCCACCCTAGAGCAACACCTCCAGCCGGGGCTCTCACACTCTGCGGCGGAGGGGCACCCTTTCATCTGGCTGACTGCACTGCCAATATTAATCGTGAACAAAAGCCAGGGTTTGAAGGTCTCTCACAGTTGGCTGCTCAAAAGTGGGTTTGTATTCAAGGCACAACAACCCAGAGAATGATTGGAAGCCTCTTAAATGTGAAGTGGAATGAAGGGACTCTCAGCCCTGGAGGAAGAGGGAGCTGGGCTAGAACACTATTCAGCAGACAGTGGAGTGGGG

Function

GO: NA

KEGG:

id description
K14530 RPP40; ribonucleases P/MRP protein subunit RPP40

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019765 True 2046 mRNA 0.51 8 43556899 43563516

Neighbor

gene id symbol gene type direction distance location
AMCG00019763 LOC102782841,LOC107589980 coding downstream 157769 43369896 ~ 43399130 (-)
AMCG00019760 acad11 coding downstream 274094 43274030 ~ 43282805 (-)
AMCG00019757 myrip coding downstream 405241 43018109 ~ 43151658 (-)
AMCG00019756 NA coding downstream 580561 42975368 ~ 42976338 (-)
AMCG00019754 NA coding downstream 841289 42695829 ~ 42715610 (-)
AMCG00019769 NA coding upstream 240644 43804160 ~ 43809705 (-)
AMCG00019771 nrn1,LOC106590090,LOC106578581,LOC107713755 coding upstream 311409 43874925 ~ 43877635 (-)
AMCG00019772 NA coding upstream 319032 43882548 ~ 43929432 (-)
AMCG00019774 ssr1 coding upstream 483171 44046687 ~ 44056603 (-)
AMCG00019776 LOC108250945,LOC106903449 coding upstream 507178 44070694 ~ 44102691 (-)
G37021 NA non-coding downstream 155 43555743 ~ 43556744 (-)
G37022 NA non-coding downstream 1390 43526407 ~ 43555509 (-)
G36977 NA non-coding downstream 253839 43266893 ~ 43303060 (-)
G36907 NA non-coding downstream 614400 42942242 ~ 42942499 (-)
G36894 NA non-coding downstream 708213 42848457 ~ 42848686 (-)
G37048 NA non-coding upstream 258818 43822334 ~ 43822820 (-)
G37171 NA non-coding upstream 845701 44409217 ~ 44410259 (-)
G37174 NA non-coding upstream 873404 44436920 ~ 44443701 (-)
G37232 NA non-coding upstream 1160258 44723774 ~ 44735394 (-)
G37290 NA non-coding upstream 1372007 44935523 ~ 44936756 (-)
G36982 NA other downstream 195993 43298231 ~ 43360906 (-)
AMCG00019761 NA other downstream 214193 43330289 ~ 43342706 (-)
G36862 NA other downstream 900506 42644324 ~ 42656393 (-)
G36817 NA other downstream 1012375 42544116 ~ 42544524 (-)
AMCG00019741 NA other downstream 1477967 42071062 ~ 42078932 (-)
AMCG00019768 NA other upstream 13793 43577309 ~ 43713777 (-)
AMCG00019799 NA other upstream 1332983 44896499 ~ 44910150 (-)
G37492 NA other upstream 2801822 46365338 ~ 46393098 (-)
AMCG00019824 NA other upstream 4328687 47892203 ~ 47901933 (-)
G37806 LOC100846954,LOC107575789 other upstream 4959152 48522668 ~ 48523702 (-)

Expression


Co-expression Network