AMCG00019772


Basic Information

Item Value
gene id AMCG00019772
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 43882548 ~ 43929432 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019772
ATGGGTATGGCACACAATGGGGAAAAGGTGCAGTTTTACAAGCCAGCAAGAGCCATGTCAAGCACAGGGAGCCGGCCCGCTAACCCTTCTCATGTGGGGCGCAGCAACATCCCACCCATCATCTCCAATGCGGAGGGCGAAGAAGTCCCAGAGTTTGAAGCGTTTGGGCTTGCGGTACGAGGACATAAGCCTAACCTAAGCAGCTTCCTGGATGTGTGGGATGTGAACATGCTCTGTGAGACGCGGGAAATCAACAAGAAGGAACACCGAACAGATATGTTCGTGAATGAGAACCTGATTGTGCGTCGGGGACAACCCTTCCAAATCAAGATCACCTTCGATCGAGAGTACGTGGCTGAGAAGGACCAGTTCTGGGTGGAGTTCCTCATTGGTGCCTACCCACAGGTAAACAAAGGTACTTATATCCCTGTCTTGCCAAACCAAGACCAGGAGGGGATGAAATGGGGTGGGAGGGTGCTGGAGAGTGAGAACAATGTCATCACTATGGCCATCACCCCGGAACCAGATTGCATCGTGGGGAAGTTCCGCATGTACATTGCAGTCATGACCCCTTACGGCATCCGCAGAACAAGGAGGGACCCCAAGAAAGATCTCTACATCTTATTCAACCCTTGGGCTCCAGATGAATCTGTTGTTAAGCATGTGTTTGAGTATGGAGTTCTGGATGCCTGCCTCAATGTAATGGACAGAGCACAGATGCCTCTTTCTGGGAGGGCAAACCCAATCAAAGTGAGCCGTGTCGCTTCTGCAATGATCAATTCCAGGGATGACAATGGGATACTTGAGGGCAACTGGAGTGGGGACTACACCTATGGCGTTTCACCTACGGCCTGGACGGGGAGTGTGGAAATCCTGCTAAACTATTCATCCGCTGGTGTGCCGGTGTGCTATGGCCAGTGCTGGGTCTTTGCTGCGGTGTTCAATACCTTTCTGCGCTGTCTGGGGATACCGGCTAGGGTTGTAACCAACTACTTCTCAGCTCACGACAATGACCGCAACTTGAAAACTGACGTCATATTGGATGAGGATGGGAAAGTGGATGTGAAATTAACCAAGGATTCCATCTGGAACTACCACTGCTGGAATGAGTGTTGGATGGCAAGACCTGACCTACCACCGGGATTTGGCGGCTGGCAGGTTGTGGATGCAACTCCCCAGGAAACTAGTGATGGGATGTACAGATGTGGCCCTGCTTCAGTCCAAGCTATCAAGCATGGGAATATCTGCTATCCTTTTGACACTCCCTTCATTTTCGCTGAGGCATgttctactgcactgtactgtctGTATAATCATGTTAATAGTGACATTGTTTATTGGAAAAGGAATAAAGATGGGACTCAAGAAGCCATTAAAGTTAACACACACCATGTGGGAAAAATGGTATTGACTAAAGAAGTTGGCCGAGATGGAAGCAAAGACATTACTGAAAGCTACAAATTCCCCGAAGGAAGTGAGGAGGAGCGTCTGGCCATGGAGGCCGCTGTGAAGTACGGGATGTCGCCATTGTCTGTCTTGCTCCCAGAGGCGGATGTGGAAATGGATGTGCATGTGGAGGACGTGGCAATTGGCAGTGACTTCAAACTGACCTTGCAGTTCAAGAATAAAAAGGCGAAGCCACGCTCCTTGAACATCTACGTTAgtggcaacattgtgttttaCACGGGTGTCACCAGATCCCAGTTCAAGTCTAAGACAATTGAGGTGAAAGTGGGACCTTTGCAAACTCAGACCGTGGAGGTGGAGGTCCAGGCCCGGGAGTACATGAACAAGCTGGTGGAGCAGGCCATGCTGCACTTCATCATCACGGGCCGCATCAACGAGACCTCGCAGATCGTCACCTCCCGCAGTCTCGTCACGCTGAAAGTGCCCAAGCTGACCGTCAAGACGGCTGGTTCACCTAGAGTGATGGAAGAAATGCTGGTCACGGTGGAATTCACCAACCCCCTGAAACAAAAGCTGGAGAACGTGTATATGCGCATAGAGGGGCCGGGCCTAATGGGAGCcaaagtgaaaatgtacagGGCGTCCTCTGCCCGGGATCTGCCCCTGCCACTGAACCTGTTCCTGCCCGGGTCCTGCCCCTGCCACTTACTTTGTTCCTGCCGGGGACCTGCCCTTGCCACTGTTCCTGCCCAGCACTTGCCCCTGGCACTGAGTCTGTTCCTGGCACTGGATTCTCCCAGAGCCGGAGTAAACCTCTTTAGTATTCTGGGTGTCAGTCTGGCGCAAAAAGACACCGGCTTTCTCCAAATCCGATTGACGTCAGAGCAAGAAATTCCTCCTGTCAGACACCCACACAGCGTCACTGCACTGTCCGTGCGCCGGGTCCCTGGAGGCGCCTCCATCTAG

Function

GO: NA

KEGG:

id description
K03917 F13A1; coagulation factor XIII A1 polypeptide

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019772 True 2373 mRNA 0.52 15 43882548 43929432

Neighbor

gene id symbol gene type direction distance location
AMCG00019771 nrn1,LOC106590090,LOC106578581,LOC107713755 coding downstream 4913 43874925 ~ 43877635 (-)
AMCG00019769 NA coding downstream 72843 43804160 ~ 43809705 (-)
AMCG00019765 NA coding downstream 319032 43556899 ~ 43563516 (-)
AMCG00019763 LOC102782841,LOC107589980 coding downstream 483418 43369896 ~ 43399130 (-)
AMCG00019760 acad11 coding downstream 599743 43274030 ~ 43282805 (-)
AMCG00019774 ssr1 coding upstream 117255 44046687 ~ 44056603 (-)
AMCG00019776 LOC108250945,LOC106903449 coding upstream 141262 44070694 ~ 44102691 (-)
AMCG00019777 NA coding upstream 175064 44104496 ~ 44112240 (-)
AMCG00019778 NA coding upstream 256100 44185532 ~ 44189156 (-)
AMCG00019779 skida1 coding upstream 310058 44239490 ~ 44241946 (-)
G37048 NA non-coding downstream 59728 43822334 ~ 43822820 (-)
G37021 NA non-coding downstream 325804 43555743 ~ 43556744 (-)
G37022 NA non-coding downstream 327039 43526407 ~ 43555509 (-)
G36977 NA non-coding downstream 579488 43266893 ~ 43303060 (-)
G36907 NA non-coding downstream 940049 42942242 ~ 42942499 (-)
G37171 NA non-coding upstream 479785 44409217 ~ 44410259 (-)
G37174 NA non-coding upstream 507488 44436920 ~ 44443701 (-)
G37232 NA non-coding upstream 794342 44723774 ~ 44735394 (-)
G37290 NA non-coding upstream 1006091 44935523 ~ 44936756 (-)
G37367 NA non-coding upstream 1334650 45264082 ~ 45264334 (-)
AMCG00019768 NA other downstream 168771 43577309 ~ 43713777 (-)
G36982 NA other downstream 521642 43298231 ~ 43360906 (-)
AMCG00019761 NA other downstream 539842 43330289 ~ 43342706 (-)
G36862 NA other downstream 1226155 42644324 ~ 42656393 (-)
G36817 NA other downstream 1338024 42544116 ~ 42544524 (-)
AMCG00019799 NA other upstream 967067 44896499 ~ 44910150 (-)
G37492 NA other upstream 2435906 46365338 ~ 46393098 (-)
AMCG00019824 NA other upstream 3962771 47892203 ~ 47901933 (-)
G37806 LOC100846954,LOC107575789 other upstream 4593236 48522668 ~ 48523702 (-)
AMCG00019865 LOC102778867,LOC107557236 other upstream 6666764 50596196 ~ 50698163 (-)

Expression


Co-expression Network