AMCG00019783


Basic Information

Item Value
gene id AMCG00019783
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 44338512 ~ 44340800 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019783
ATGTGTCATCTCGGTGTGAGTGGGCTGGTGAAGTTCTCAGAGCTCAAGAGCTCTAGCCAGTCAGCGAAGGGCTTGAAAGGGGCAGGAGGAGCCGGCCTGTCGGACAGCATTATCACCAGGCGGGAGGAGGACACCTACACCCCGGCCCAGGAGGTAGGGGAGCCGGGGGAGGAGGCCGAGGGCAGTCTGGCGGAGTCCTCGGGCACAGAGGGCAGGCCGCGCAGGAGGAGAGCAGCCAAGGGCCCAGTGAAGAGTGCCGGTGGCAAGCCGGAAGGGGGCGAGGAGAAGCCTAAAGGTCGGCGGCAGAGAGACTTTGACAGCCTGGCGCTGGACGAAGACAGCGGGGATGACAGGAAAGCCCAAGACCACGGGCCGGTACCAGAGGAGGTATGGACCCAGAACCAGCAGAAACTTCTGGAGCTGGCGCTGCAGCAGTACCCCAGGGGCACGGCCGAGCGCTGGGACAAGATCGCCAAAGTCGTACCGGGAAAATCCAAGGTAATGCCACTTCCTGACTCGGCCTTCCACTACCACTCAGATACAGCACACGGGCCTGGCTCTATCAGCGCTGTGGGCCAGGACTGGCAAAGGGAGTAA

Function

GO:      GO:0008536

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019783 True 597 mRNA 0.63 2 44338512 44340800

Neighbor

gene id symbol gene type direction distance location
AMCG00019779 skida1 coding downstream 96566 44239490 ~ 44241946 (-)
AMCG00019778 NA coding downstream 149356 44185532 ~ 44189156 (-)
AMCG00019777 NA coding downstream 226272 44104496 ~ 44112240 (-)
AMCG00019776 LOC108250945,LOC106903449 coding downstream 235821 44070694 ~ 44102691 (-)
AMCG00019774 ssr1 coding downstream 281909 44046687 ~ 44056603 (-)
AMCG00019782 dnajc1,LOC107589882 coding upstream 26101 44366901 ~ 44383650 (-)
AMCG00019788 pip4k2a,LOC106578380 coding upstream 177051 44517851 ~ 44542980 (-)
AMCG00019789 NA coding upstream 214381 44555181 ~ 44557413 (-)
AMCG00019801 cunh7orf25,LOC107722560,LOC105900630 coding upstream 511328 44852128 ~ 44852850 (-)
AMCG00019800 fbxl7,LOC107718179,LOC107689422,LOC107589836 coding upstream 678340 45019140 ~ 45033185 (-)
G37048 NA non-coding downstream 515692 43822334 ~ 43822820 (-)
G37021 NA non-coding downstream 781768 43555743 ~ 43556744 (-)
G37022 NA non-coding downstream 783003 43526407 ~ 43555509 (-)
G36977 NA non-coding downstream 1035452 43266893 ~ 43303060 (-)
G36907 NA non-coding downstream 1396013 42942242 ~ 42942499 (-)
G37171 NA non-coding upstream 68417 44409217 ~ 44410259 (-)
G37174 NA non-coding upstream 96120 44436920 ~ 44443701 (-)
G37232 NA non-coding upstream 382974 44723774 ~ 44735394 (-)
G37290 NA non-coding upstream 594723 44935523 ~ 44936756 (-)
G37367 NA non-coding upstream 923282 45264082 ~ 45264334 (-)
AMCG00019768 NA other downstream 624735 43577309 ~ 43713777 (-)
G36982 NA other downstream 977606 43298231 ~ 43360906 (-)
AMCG00019761 NA other downstream 995806 43330289 ~ 43342706 (-)
G36862 NA other downstream 1682119 42644324 ~ 42656393 (-)
G36817 NA other downstream 1793988 42544116 ~ 42544524 (-)
AMCG00019799 NA other upstream 555699 44896499 ~ 44910150 (-)
G37492 NA other upstream 2024538 46365338 ~ 46393098 (-)
AMCG00019824 NA other upstream 3551403 47892203 ~ 47901933 (-)
G37806 LOC100846954,LOC107575789 other upstream 4181868 48522668 ~ 48523702 (-)
AMCG00019865 LOC102778867,LOC107557236 other upstream 6255396 50596196 ~ 50698163 (-)

Expression


Co-expression Network