AMCG00019815



Basic Information


Item Value
gene id AMCG00019815
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 46881732 ~ 46907697 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00019815
TACTGTTCTTCCGAGTCAGGTCCAAGATGCCTGACCAGTTTGACCAGTCCGTGGTTCTAAATCAGCTGAGGTATTCAGGGATGCTGGAGACGGTGAGAATCCGGAAGGCTGGCTTCCCAGTGAGGAGACCCTTTCAGGACTTCTGCATCAGATACAAAGTGCTCATGAAGGACTTGGCTTTTCCTGAAGATTTGAAGGGGAAGTGTGCCAGTCTGCTCCAGCTCTATGACACCAGCAGTACCGAGTGGCAGATTGGAAAAACAAAGGTTTTTCTCCGGGAGTCTTTGGAAAACAAGCTGGAGAAGCAGCGTGAGGTGGAGGTGTACAAAGCTGCCATGATCATCCAGGCTCACATCATGGGCTACGTAGCACGGAAGCAATACCGCCGACTGCTGCAGTGCATCGTGGTCATTCAGAAAAACTACCGCGCCTTCTACTGGAGGAGGAGGTTCCTGCACCTCCGCTGTGCCGCTCTGATCTTCCAAAAGCGAACCAGGGGACGTCAGGCCCGTAGATTCTATTGCCAGCTactggaggagaggaggaggagagaggaagaggaggaggaagtgcggcggcagcagcagcaacagagagaggaggaagaggagaggGAGAGACAAAGATTGGAAGCTGAACGTCTTGCCCAGGAGgTGGCAGAGGCCCAAAGAACAGAGATTaagaagaaggaggaagaggaggaagagctgCCATCCCTGGAGAAAGCCGAGGTGGGGCTGCGGGAGCGAGGGGGTCAGGACAGCATGCAGGTGGAGGAGATCCTGCGGCTGGAGCGGGAGATCCAGGAGCTGCAGAGACGGAAGGAGCGACAGGAGCTGTCCCTGACAGAGGCATCGCTGCTCCGCCTGCAGCTGCTACGTGACCAGGAGCTGCGGCGTCTGGAGGACGAGGCCTGCCGCGCCGCACATGAATTCCTGGAGTCGCTCAACTTTGACGAGATCGATGAATGCGTGCGCAACATCGAGAGCTCGCTGTCGGGCAGTGGCGGCGGTTTGGTGGATGTGGGCGAAGAAGCTAATGGGAAGCCCACATTCAATTTCAGCCAGCCCTACCCccgggaggaagaggaggtggaTGAGGGCTTCGGGGCGGATGAGGACGCCTTCAAGGACTCGCCCAACCCCAGTGAGCATGGCCACTCGGACCAGCGCACCAGTGGCATTCGCACCAGCGATGATTCCTCTGAGGAGGACCCCTACATGAATGACACCGTTATCCCCAGTGTGCCCTCCCCCAACACAGGCGGCCTCcctctgcccccaccccccgcctTCCAGGGCCTGGGCGTCCCAGCACAGGGCTCGGTGGAGCTCATCCCCCCCAACGAGGACTCCGACTATGATCAGGACGACTATGATGAGGGCGCCATTGTCTCGGGCAGCAGCATAGCGTTCTCCAACCCCCGCAGTGGACAGTGGTCGCCGGACTACCGCTGTTCCCTGGGCACCTACAACAGCTCGGGGGCCTATCGCTTCAGCTCAGAAGGAGCCCAGTCTTCATATGAAGACAGCGAGGATGACTTTGACAGGTTTGACACCGATGATGAGCTATCCTACCGCAGAGACTCTGTGTACAGCTGCGTCAGTCTGCCCTACTTTCACAGCTTTCTGCATATCAAAGGTGGTCTGATGTACACATGGAAGCGGCGTTGGTGCGTCCTGAAGGATGAGACGTTCCTGTGGTTCCGCTCCAAGCAGGAGGCCCTGAAGCAGGGCTGGCTGCACAAGAAGGGTGGCGGCTCATCCACGTTGTCGCGCCGCAACTGGAAGCGCCGCTGGTTCGTCCTGCGGCAGAGCAAGCTCATGTACTTTGAGAACGATGGCGAGGAGAAGCTCAAGGGTACTCTGGATGTGCGCAGCGCAAAAGAAATTATTGACAACGCAGGCAAGGAGAATGGGATCGACGTTGTCATGCCGGAACGCACCTATCACCTGATTGCCGAGTCTGCCGAGGATGCCAGGCAATGGTTCAGCGTCTTGAGCCAAGTCCATGGATCAACAGAGCAGGAGATTCGGGAAATGCACGATGAGCAGGCCAACCCCCAGAATGCAGTGGGAACTCTTGATGTGGGCCTCATTGATTCTGTGTGTGCTTCTGACAATCCAGAGAGACCCAACTCGTTTGTGATCATCACAGCCAATCGCGTCCTGCACTGCAATGCGGACACCCCGGAGGAAATGCATCATTGGATAACCCTGCTGCAGCGCTCCAAAGGCGACACCCGGGTGGAGGGGCAAGAGTTCATTGTTAGAGGGTGGCTGCATAAGGAGGTGAAGAACAGCACAAAGTTGTCTCTGAAGCTAAAGAAGCGCTGGTTTCTGCTGACCCACAACTCCCTGGATTACTACAAGAGCTCGGAGAGGAGCGCGCCCAAACTGGGCACGCTGGTGCTCAACAGCCTGTGCTCAGTAGTGCCTTCAGATGAGAAGGTCTTCAAAGAAACCGGCTACTGGAATGTGACCGTATACGGCCGGAAGCACTGTTACCGGCTCTGCACTAAGCTGCTGAACGAGGCCACGCGTTGGGCCAGCGCCATCCAGAACGTTATCGACACTAAGGTGCCCATCGACACGCCCACCCAGCAGCTGATCCAGGACATCAAGGAGAACTGCTTGAATTCTGAAGTGGTGGAGCAAATCTACAAGCGGAACCCCATTCTGCGTTACACCCATCACCCCCTGCACTCCCCGCTTCTGCCTTTGCCTTACGGGGACATCAGCCTGAATTTGCTGAAAGACAAGGGCTACACCACCCTGCAGGAAGAGGCCATCAAGGTGTTCAACTCCCTGCAGCACATGGAGTCCGTGCCTGACCCCGTGCCCCTCATCCAGGGCATCCTGCAGACCGGCCAGGACCTCCGACCCCTACGGGACGAGTTGTACTGCCAGCTGATCAAGCAGACCAGCAAAGTGCCGCAGCCTGGCATCGTGGGCAACCTGCGCAACTGGCACATCCTGGCCTGCCTCAGCTCCACCTTCACCCCCTCACGTAGCATCCTCAAGTACCTCAAGTTCCACCTCAAGAGGACGCGAGAACACTTCCCAGGGACGGAGATGGAGAAGTATGCTGCCATCACCTCTGAGTCTCTGAAAAAGACCAAATCCAGGGAGTTTGTGCCCTCGCAGGAGGAAATCAAGGCCATCATCAGCAGACAAGAAATGACCACCACAGTATACTGCCATGGGGGCGGCTCCTGCAAAATCACCATCAACTCCCACACCATGGCTGGAGAGGTTGTCGAGAAGCTGATCAGGGGTCTGGCCATGGAAGATAGCCGGAACATGTTCGCCCTGTTTGAGCACAACGATTCCACTGACAAGGCCATAGAGAGCCGGACTGTGGTGGCTGATATCTTGGCCAAGTTTGAAAAAGCCCCTATTGAAAATACAGGTCCATTTAATTTATATCAATgCTTTCGGCAAGTCAAGAAGAGGGCAGCAAGGGCCCCTGAAGAGAGCCTGCAGTTCCTGGCGGCCCTGCGTCTGCAGTATCTGCTCGGAGACTGCGGCACCCCAGCCTCCTCCGCCACCCCCACCATCCCGCCCATGGAGCAGCTATACCCAATCAGCCGCCTGCGAGCCCGCGTGACCCAGTCAGCCCGCACCTTCTCCCCAGGCTCAGCCCACGAGCGCGCCGACAAGAAGCGCTCCAGCTTCCTCGAAGGCACCTTGCGTAGGAGCTTCCGCAGCGGCTCGGTCAGCAGGCAGCggctggaggaggagcaggcACTGGAGGCCTGGGTGAGGGAGGAGGTGGCGGCTGCCCGGCTTGGCATCCTTGACAAGTGGAGGAAGCTGCAGGGCGTGAGCCAGGATCAGGCCATGGCCAAGTACATGGCACTGGTGAAGGAGTGGCCAGGGTATGGCTCCACACTGTTCGACGCAGAGTCCAGGGAAGGCGGGTACCCCTCAGAGGTATGGCTGGGCGTGAGCGCTGACGCCGTGTCTGTGTACAAGCGTGGGGAGCCCAGGCCACTGGAGGTCTTCCCCTACGAGCACATCCTGTCGTTCGGAGCCCCGCTGCCCAACACCTATAAAATCGCTGTGGAGGACAGGGAGCTGCTGTTTGAAACCAACCTGGTTGTGGACATCGCCAAACTGATGAAAGCCTACATCAGCATGATTGTGAAGAAGCGCTACAGCACATCTCGCTCTGTCAGCAGCCAGGGCAGCCAGTGCAGCAGTCGA

Function


GO: NA

KEGG:

id description
K12559 MYO10; myosin X

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00019815 True 4208 mRNA 0.58 24 46881732 46907697

Neighbor


gene id symbol gene type direction distance location
AMCG00019813 NA coding downstream 445 46874934 ~ 46881287 (-)
AMCG00019809 lztfl1 coding downstream 291464 46546313 ~ 46590268 (-)
AMCG00019807 NA coding downstream 338696 46532689 ~ 46543036 (-)
AMCG00019808 NA coding downstream 371587 46501847 ~ 46510145 (-)
AMCG00019806 NA coding downstream 748558 46106283 ~ 46133174 (-)
AMCG00019816 NA coding upstream 14401 46922098 ~ 46933429 (-)
AMCG00019819 adcy8,LOC106949201 coding upstream 285866 47193563 ~ 47236854 (-)
AMCG00019818 adcy8 coding upstream 337841 47245538 ~ 47280487 (-)
AMCG00019822 NA coding upstream 753627 47661324 ~ 47667862 (-)
AMCG00019823 kcnq3,LOC107660218,LOC107721728,LOC107663349,LOC107749193 coding upstream 782668 47690365 ~ 47705884 (-)
G37608 NA non-coding downstream 48972 46827783 ~ 46832760 (-)
G37562 LOC100136012 non-coding downstream 90247 46791027 ~ 46791485 (-)
G37551 NA non-coding downstream 151562 46728942 ~ 46730170 (-)
G37539 NA non-coding downstream 208940 46638190 ~ 46672792 (-)
G37493 NA non-coding downstream 452783 46427950 ~ 46428949 (-)
G37622 NA non-coding upstream 109140 47016837 ~ 47017163 (-)
G37652 NA non-coding upstream 392430 47300127 ~ 47300628 (-)
G37681 NA non-coding upstream 779337 47687034 ~ 47688516 (-)
G37690 NA non-coding upstream 943906 47851603 ~ 47852031 (-)
G37716 NA non-coding upstream 998362 47906059 ~ 47971592 (-)
G37492 NA other downstream 488634 46365338 ~ 46393098 (-)
AMCG00019799 NA other downstream 1971582 44896499 ~ 44910150 (-)
AMCG00019768 NA other downstream 3167955 43577309 ~ 43713777 (-)
G36982 NA other downstream 3520826 43298231 ~ 43360906 (-)
AMCG00019824 NA other upstream 984506 47892203 ~ 47901933 (-)
G37806 LOC100846954,LOC107575789 other upstream 1614971 48522668 ~ 48523702 (-)
AMCG00019865 LOC102778867,LOC107557236 other upstream 3688499 50596196 ~ 50698163 (-)
AMCG00019866 NA other upstream 3798143 50705840 ~ 50712143 (-)
AMCG00019869 NA other upstream 4055716 50963413 ~ 50966929 (-)

Expression



Co-expression Network