AMCG00019822


Basic Information

Item Value
gene id AMCG00019822
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 47661324 ~ 47667862 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019822
ATGAACAAACTGAAATGCGTGACAAAGCTGTGTCCGAGAGACCTGGAAGATTATGGCTGCTCCTGCAGATACGAAGAGGAAGACATGCCCATTGATGCAATGGACAGCGCCTTTTTTATCCTACTCTCCAGCTGCTGCTCTCAGCACCGAAGATGCTACAAGGCTGCAGCTGAAAAAGACTGCAAACTGGAGCCTGGAAAGATTATCCTGAATTCAGCTTGTCCTGTTGGAAACATCACTTGTGGTAAAGCTTTGCAGTTTCGGAAGTACAATACATTTGCGGATGTCTCTGATCATTGTGAGGAAGTCTTCTGTCTGTGTGACAAGGCTACCATCGAATGCATGGCACGCTCACCTTACAATCCCTCCCTGAAGCACCTGCACAGCTCCTCTTGTCCGGTGACATACACAGAGACGCCAGTCACAGAACCAACTGACATATCCATAGAGGTGACGGAGGCTCGGGAAAACCTAACCACAGAGTCACCCAACGCTTCTCTGGAGTCTAACACAGAAGATCAGGACACCTCTACAGCAAGCAGGAAGCCGACTGTCACACCAGCATCGGCCCCCATTATACAGCCAGCCGACGCTCCTGTGAGGTTCGAAACCGTCAGCAGACCTACAAAAGAGCCCACTGATAGCTCCCAGGAGGAGGCTGAGAACGAAGGGCTGGACCCCCCCGTTTCAAAGGCAGTGCCATACTTTCCCCTCTCCATTCTGGGAGCTGCAGGTCTCATTGACTTTCCACTGGACCCTGAAGTGGAAGAGTGCACCAGCAACTCCTTCAACCAGTACAGCTCCACTGGGCGAGTGAGACAGGAGTTCCCTCTGCTGGGGGAGATGCTGCACTGCCTGACGGGACGCTGTCCACATGAGTTTGAGATGTATGGCTGTTACTGTGGCCAGGAAGGGAGAGGCAGACCGGTCGATGAACTGGACAGGTGCTGCTTCTTCCATCAATGCTGTTTAGAGCAAATCAGGTTGTTTGGCTGTCGGCCGGAACGGAAGCTGAATGCCCAAGTCAGCTGTGAAAATGGGCAGCCTATGTGCTTCGGGACTGGCATTTGTGAcaagctgcagtgtgtgtgtgacaaggCCAGCGTTGAATGCATGGCAGCAGCCGTCTACAATGACTCGGTCGCCACCCTGAGCAAGCAGCAGTGCAGTGGCGCCAGGGCCTCCTGCAGGCGCCGGCCCTACGGGAGTCGCCCCCCGGCACCCAGCCGCCCCCTGCCAGAGGACTCCAGTGAGGAGAGGGGTTTGCCTCAGGCAGGGAAGACCAGGCCAGCTCCAGGATTGGGGCGTCAATTTCATGTGCACCACCCCACCTTCGGCACCTCCCCCACAGTGGCTGGCACTCAGCTCACGACCGAGGACGTGGGAGAGGAGATGGGGGAGCAGGAGGACGAGACCACCCCGGCAGGTGGTTTCCCAACTGGACACACCAAACCTCATACTTTGAATGAAGACCTCACAAACTAA

Function

GO: NA

KEGG:

id description
ko00260 Glycine, serine and threonine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019822 True 1485 mRNA 0.55 9 47661324 47667862

Neighbor

gene id symbol gene type direction distance location
AMCG00019818 adcy8 coding downstream 380837 47245538 ~ 47280487 (-)
AMCG00019819 adcy8,LOC106949201 coding downstream 424470 47193563 ~ 47236854 (-)
AMCG00019816 NA coding downstream 727895 46922098 ~ 46933429 (-)
AMCG00019815 NA coding downstream 753627 46881732 ~ 46907697 (-)
AMCG00019813 NA coding downstream 780037 46874934 ~ 46881287 (-)
AMCG00019823 kcnq3,LOC107660218,LOC107721728,LOC107663349,LOC107749193 coding upstream 22503 47690365 ~ 47705884 (-)
AMCG00019828 NA coding upstream 122702 47790564 ~ 47790887 (-)
AMCG00019826 NA coding upstream 135202 47803064 ~ 47878857 (-)
AMCG00019827 NA coding upstream 241685 47909547 ~ 47922255 (-)
AMCG00019825 ift57 coding upstream 257934 47925796 ~ 47935253 (-)
G37652 NA non-coding downstream 360696 47300127 ~ 47300628 (-)
G37622 NA non-coding downstream 644161 47016837 ~ 47017163 (-)
G37610 NA non-coding downstream 751752 46835708 ~ 46909572 (-)
G37608 NA non-coding downstream 828564 46827783 ~ 46832760 (-)
G37562 LOC100136012 non-coding downstream 869839 46791027 ~ 46791485 (-)
G37681 NA non-coding upstream 19172 47687034 ~ 47688516 (-)
G37690 NA non-coding upstream 183741 47851603 ~ 47852031 (-)
G37716 NA non-coding upstream 238197 47906059 ~ 47971592 (-)
G37738 NA non-coding upstream 431536 48099398 ~ 48099619 (-)
G37815 NA non-coding upstream 875781 48543643 ~ 48549181 (-)
G37492 NA other downstream 1268226 46365338 ~ 46393098 (-)
AMCG00019799 NA other downstream 2751174 44896499 ~ 44910150 (-)
AMCG00019768 NA other downstream 3947547 43577309 ~ 43713777 (-)
G36982 NA other downstream 4300418 43298231 ~ 43360906 (-)
AMCG00019824 NA other upstream 224341 47892203 ~ 47901933 (-)
G37806 LOC100846954,LOC107575789 other upstream 854806 48522668 ~ 48523702 (-)
AMCG00019865 LOC102778867,LOC107557236 other upstream 2928334 50596196 ~ 50698163 (-)
AMCG00019866 NA other upstream 3037978 50705840 ~ 50712143 (-)
AMCG00019869 NA other upstream 3295551 50963413 ~ 50966929 (-)

Expression


Co-expression Network