AMCG00019829


Basic Information

Item Value
gene id AMCG00019829
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 48176966 ~ 48184937 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019829
GCATGAGGGTGTCTCTCTAtctttttccctctccctctcccctctctctctctctctctctctgtgtggctCTTTGGTGCTGTGCGATCCTAAATGTCTGTGCAGCCCATTAGAGGGTAGGTGGAGTCTCCAGGTTCTTCTGCGCCAGACCCGGCCAAGGATACAGTCGTAAGAGACAGAGACTCTCTGCCGGCCATCGCTACATGCTCCAAGCTCCAGCCCCCTGAGGTCTCACCAAGTTCTTGGAGAAAGCAACGACAGTCGGGGTCTAAGAAGTTTTAGGGAAGGCCGAGCATTACaaacatttatagatatatttttatttctgtgattCCCATCTGACCATGGATCAGCAGCAGTTCCAGGCGGCCACAGCTGACAAACTGGAAGTGTTGGGTGTTGGGGAGGATGAGGCCGGGACTCCCATCAGTGCCCTGACCATCCTCGCCCTGCTAGAGCGTGTGGCTGGCATCATTGACAACGTGCAGGCCTGCCAGCAGCGCATGGAGGAAAGgcagctggagctggagaaTAACATCAAGACCATCCAAATCGATGTGCTGAAGCTGGCCAAGGACCACACCATTACGGGCAACACCGTGGAGAAGCTGCTGGACAAGACCCGCAAGATCAGCTCCAACGTGAAGGATGTGCGCCAACGCGTGGACAAGCAGAACGTGCGCGTCAAGAAGGTCGAATCAACGCAGGAGGAGCTGCTCACAAGAAACAAGTTCAGGGTGGTGATCTACCAgGGGGACACTGAGATCCCTTCAGTTGCTGTCACAAAGACCCCCAAGGGAGCTGGCGTGGGGAGCACCGTGGAGCCGGACACCTATGAGCCACCTGCCGACTTGTCCTCGGACGAGGAGTACATGGTTGTGGAAGAGGCCGACTCGTCCAGGGCCGCCCGGCTGAAGAAGACGGGCATGAAGCGCATCGAGAGCATCAAGAAAGTCTTCACCAGGGAGAACATGTCTAAGACCAAACAGAACCTGGGCACAAAGGTCAACCGGATCAGCACGCGCATCGTAACCCCCGAGCGCCGGGAGAAGATCCGTCAGTCCGGGGAGCGGATGAAGCAGTCTGGCGAGAGGCTGAAGGAGTCCATCAGCAAGGCCGCGCCCTCCAAGGAGTCCTTCCACTTCAAGATCAAGAAGGACAAGGAGAGGACTGTGGCAGAGGGACAGGAGGGCACACAGGGGGCGCTGGGCGAGCAAGGGTCCGCCGAGGCCGGAGCAGCTGCCCCACCTCCAAAAGCCAGCCGCAAACCCAATCCTGACGTGACCTACACCGAGGTGGTGACCGAGGTAAAGCACGTGAGCCATGCAGGCGAGCCTGAAGCACCACAACAGGAAGATGGCAAGCTGCTGTACGCCGAGTCTCTGGAGGTGGCCACGGCGGAGGAGGGCAAGGGGGAGCCAGTGGAAGCGGCAGTGCAGGATATGAAGCAGCCATCTTAAGCAGGCATCCCATTGCAGGGAAACGAGCCCAAGTGTTTTAACGGTTGAAAAAAGTTCAGTTTCATAATAAATTACATCgtttattttgcatattgaaCTTTCGAGGGAGTCGTGTCTTTagagattgttttcttttgtcttttgtgtggGGAAATGCAGCCCTGGGCTCATCAGCAGATGAAGTGTGAACAGAATCAAGATGAAAACACACAGCGCTTCCTATAATGTATGATAGTGCATGCTATGTATATTATTGGAGACTGGTATTGTTTCTCTGGAtggtactttttctttttacgtTCTGAGGGCAATCAGATTCTCTGGTAGATGAGAAACCTGAGAAACAGAATAACACAGTGTGAAGGTGAACTtgatatgttatataaaaaaagggtTGCTGGATGTTcccaagatttattttttcttttctgtggtgtcccaagaaaattaaacatgacTGTTGGTGACTGGCTTCTAAGTTAATATTTTAGCAGACATGAAGTGGTGTCATCTAGCTAGGATCGTAGGTGGTGAAAGTGGTTTAATGTTGCACAGCATGATAAAGGAGTCAAGTGTTTtgttgaagaaataaaaagaaagtaaagTGAGACGAACTGAATATACTTTAATAGGATTTTGACACGtcaggttgttttgtttttctcatgtacgttttattttacattaagaaGTCTAGTCTCCAAAACTTCTGGTACAGTAAATGACCATCTCTACAAAATTGGACTAGATGGACATAACCTTTTAAAGAACTCAATCAGCTGGTCTCTGAGGAGTATCTTGAAAAAAATAGGAATATGGTAAAGACaagatgtttattacaaaccgtaggtttacatttatttaaaatgcataaacgTTAGGCCCACGTCTGCAGTCTGTACATCTACTCTTAAGAATGACATTTTGATAATCAGTAATTATAATCTGGTCTCAATGTACTGTGTGTTGCTTCAAAAGCAACCTTTGGTAGCTCTGTTAAGTATTTTTCAGTAAATGTAGTTCATTCTATTGGTTAGTCATGTTATAAGTATAAAATACCAATAGGGCGTTGTCTTGCTAGTTATGATTTTGCTTCTTCCAAACTATCAACATAGACCCTGCTTGCTGCAATGGAGAGTGACATTTTGcatgaatttaaatgtaaaatatcttgCCACCcaagtgaaaaatatatcaaatgtcCTTAGTGAATGAACTGTATAAACCACTTTGCAGCTAAAGTTGAgttcagttattttatatatatatatatatatatttttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019829 True 2754 mRNA 0.47 2 48176966 48184937

Neighbor

gene id symbol gene type direction distance location
AMCG00019825 ift57 coding downstream 241713 47925796 ~ 47935253 (-)
AMCG00019827 NA coding downstream 254711 47909547 ~ 47922255 (-)
AMCG00019826 NA coding downstream 298109 47803064 ~ 47878857 (-)
AMCG00019828 NA coding downstream 386079 47790564 ~ 47790887 (-)
AMCG00019823 kcnq3,LOC107660218,LOC107721728,LOC107663349,LOC107749193 coding downstream 471082 47690365 ~ 47705884 (-)
AMCG00019832 tmeff1 coding upstream 5200 48190137 ~ 48219430 (-)
AMCG00019838 NA coding upstream 192706 48377643 ~ 48400596 (-)
AMCG00019839 NA coding upstream 380673 48565610 ~ 48598978 (-)
AMCG00019846 dnajb6,LOC105900649 coding upstream 1001377 49186314 ~ 49198381 (-)
AMCG00019847 ube3c,LOC106578613 coding upstream 1039961 49224898 ~ 49268250 (-)
G37738 NA non-coding downstream 77347 48099398 ~ 48099619 (-)
G37716 NA non-coding downstream 205374 47906059 ~ 47971592 (-)
G37690 NA non-coding downstream 324935 47851603 ~ 47852031 (-)
G37681 NA non-coding downstream 488450 47687034 ~ 47688516 (-)
G37652 NA non-coding downstream 876338 47300127 ~ 47300628 (-)
G37815 NA non-coding upstream 358706 48543643 ~ 48549181 (-)
G37836 NA non-coding upstream 493239 48678176 ~ 48688913 (-)
G37874 NA non-coding upstream 682228 48867165 ~ 48867486 (-)
G37942 NA non-coding upstream 1177366 49362303 ~ 49366167 (-)
G37950 NA non-coding upstream 1292442 49477379 ~ 49477584 (-)
AMCG00019824 NA other downstream 275033 47892203 ~ 47901933 (-)
G37492 NA other downstream 1783868 46365338 ~ 46393098 (-)
AMCG00019799 NA other downstream 3266816 44896499 ~ 44910150 (-)
AMCG00019768 NA other downstream 4463189 43577309 ~ 43713777 (-)
AMCG00019761 NA other downstream 4834260 43330289 ~ 43342706 (-)
G37806 LOC100846954,LOC107575789 other upstream 337731 48522668 ~ 48523702 (-)
AMCG00019865 LOC102778867,LOC107557236 other upstream 2411259 50596196 ~ 50698163 (-)
AMCG00019866 NA other upstream 2520903 50705840 ~ 50712143 (-)
AMCG00019869 NA other upstream 2778476 50963413 ~ 50966929 (-)

Expression


Co-expression Network