AMCG00019866


Basic Information

Item Value
gene id AMCG00019866
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 50705840 ~ 50712143 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019866
ATGCCCTGTCCTCTCCGGGGCAGACTGCACATGGACCCGCACGCCACAACAAGCGTGCTCTCCGCGCAGGAAGTGCAGCAGCACAAACAACCCCCGCCCGACGAGCAGCCACGGCCGCGCAGACCTCGGCGGCTCTCAGGACCCGGGAAACCCACCCAGCCGAGGGGCAAGTGTCAGTCAAAGCAGCGCGGCGCACGCTGCGTCCGAGTGCGTCTCCCGTGCCAGTGTGTGCCAGAGCCGCGCAGCGCAGCGCAGTCACATGGCCGTGTTGCTGTCCTGGCGGCGCAGCAAGCCTGGCTCTGCGCACTTCCTCTTTCTAGGGCAGCGCAGATGTTGAAACCGAGTGCGGGGCTGCGCCGAGGCCGACCGACTCGGGCTCGCCTGCCTACACTCGGCCAGAAAACGTCGCTGAGTGCATTACGGCTCCATGATTGGACGGAGGAATACAATCTCGAAAGGCGATTGGCCGGGGATCCCCGAGGCCAGGCGACCGTGTTCCCGGCGTTTGGAGAAGTAAACAGGCCGAGGGCTCAGGGTTTGCAGTGCAGTGCGGTCACGGGGTCTGGCGCTGTGGTCGGTCGGAGCCCAGGCGACGCAGGCAGAGCCGCCCCTCAACCAGAGGCGCCCGGTCCGCCTTTCAGCATGTCCGCCTGA
>TU47554
GGGCATGTTGAGGCGCAACGTCCTTTTCTTCTGCTTGGAAGTCTTCTTCGCagcatctttctttttcttcgtGTCCATCGCAGTGCTTCCCATTGTCGACAGATCTTGAAGTTGTTGTTTCGGTTGTTGTAAAGCAGAAGGCAGTTGTTTGGTCTTTATTTCCCCGCTGACGCTCTGGGTCTCTGGATAGAAGTCAAGCCTCCAGCAGGAAAATGCGCGGACAGCCCAAAGGTGTGGTGGATGTTAACGAAGCAATTTCAACTGCCACACTGTcgtttaataaataattgaattagcTTAATACTAACAACAACACCAACGAAGAGTGTTCAGTTGCACCCCAGAAAGTGCGCAGGGAGGAAAGCATGCGCTGTTATATGAGGCGCTTATGGATCTATTCTGCAGAGGAAAGCGCAGACCTGGAATTAAAAATGACCAAATGAGACGCAACACCGTGCGTGCACTGCCTGTTGCAAAGCACCTGacattcaaaaagaaaagcacacaaAATGGGAGGCGTGCTTGTGCGATGCCCTGTCCTCTCCGGGGCAGACTGCACATGGACCCGCACGCCACAACAAGCGTGCTCTCCGCGCAGGAAGTGCAGCAGCACAAACAACCCCCGCCCGACGAGCAGCCACGGCCGCGCAGACCTCGGCGGCTCTCAGGACCCGGGAAACCCACCCAGCCGAGGGGCAAGTGTCAGTCAAAGCAGCGCGGCGCACGCTGCGTCCGAGTGCGTCTCCCGTGCCAGTGTGTGCCAGAGCCGCGCAGCGCAGCGCAGTCACATGGCCGTGTTGCTGTCCTGGCGGCGCAGCAAGCCTGGCTCTGCGCACTTCCTCTTTCTAGGGCAGCGCAGATGTTGAAACCGAGTGCGGGGCTGCGCCGAGGCCGACCGACTCGGGCTCGCCTGCCTACACGTATgtctaattattgttattatcaggCAGATGCGCGGGGCGTTGTAAAGTAGAGGTCGCATGCCTGTAGCGCACATccccgcaggtctgcgcagatctgcacagatctgcacaatgccgccgctcccattggtggagcggtGCAGACCACACATGGACACAAGTGATGCGCTTGTCTCCCTAGTGGCTGCTTTTGCATGGTGTCGCCTATGTATGTGACCAGAGGAATGTGTCCTTTCCATTGCATGTACTTGAAATGAGAAACTGAACTCGAAGTGGGTAAACCGTTGTGATGAGTTCAACTTCTtttccaaccccccccacacacacacacacactaaaaatacagaagtggaactagttttttttctctcttttcttgaAGGAATGAGTGCAAAACACAAGCAGTGTTCGCTATTTGAAAAGAGACATTCAAGCCACACTTTGTACACTTTGGGGTCAACGATTCATTGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019866 False 654 mRNA 0.67 2 50705840 50711614
TU47554 True 1396 TUCP 0.53 1 50710748 50712143

Neighbor

gene id symbol gene type direction distance location
AMCG00019862 actr3b,LOC107550018,LOC107664653 coding downstream 195973 50494102 ~ 50509867 (-)
AMCG00019863 NA coding downstream 354596 50345149 ~ 50351244 (-)
AMCG00019860 NA coding downstream 643716 49998081 ~ 50062124 (-)
AMCG00019859 htr5a,LOC106578632 coding downstream 855121 49848558 ~ 49850719 (-)
AMCG00019857 insig1,LOC107094588 coding downstream 998457 49699238 ~ 49707383 (-)
AMCG00019871 NA coding upstream 208123 50920266 ~ 50921526 (-)
AMCG00019868 kdsr,LOC107681813,LOC107727538 coding upstream 215137 50927280 ~ 50943520 (-)
AMCG00019870 vps4b coding upstream 233729 50945872 ~ 50952372 (-)
G38053 LOC105030512,LOC106573797 non-coding downstream 216543 50486380 ~ 50489297 (-)
G38045 NA non-coding downstream 331128 50374487 ~ 50374712 (-)
G38016 NA non-coding downstream 817649 49887929 ~ 49888191 (-)
G38007 NA non-coding downstream 933106 49772504 ~ 49772734 (-)
G37950 NA non-coding downstream 1228256 49477379 ~ 49477584 (-)
G38130 NA non-coding upstream 36610 50748753 ~ 50749458 (-)
G38135 NA non-coding upstream 54654 50766797 ~ 50767409 (-)
G38139 NA non-coding upstream 72847 50784990 ~ 50786016 (-)
G38145 NA non-coding upstream 118490 50830633 ~ 50843640 (-)
G38152 NA non-coding upstream 133834 50845977 ~ 50850167 (-)
AMCG00019865 LOC102778867,LOC107557236 other downstream 7677 50596196 ~ 50698163 (-)
G37806 LOC100846954,LOC107575789 other downstream 2182138 48522668 ~ 48523702 (-)
AMCG00019824 NA other downstream 2803907 47892203 ~ 47901933 (-)
G37492 NA other downstream 4312742 46365338 ~ 46393098 (-)
AMCG00019799 NA other downstream 5795690 44896499 ~ 44910150 (-)
AMCG00019869 NA other upstream 251270 50963413 ~ 50966929 (-)

Expression


Co-expression Network