AMCG00019869


Basic Information

Item Value
gene id AMCG00019869
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 50963413 ~ 50966929 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019869
AAAGCGATAAACATTGCCAGCAAAGCCTCTGAGGAAGACAATGCAGAGAACTATGAGGAGGCTATCCGCTTATACCAGCATGCTGTTGGGATCTTCCTACACATAGTCAAACGTGAACCACAGGGGAAAGAAGGCAACCAGAAAATCAGAGAGAAGTGTGCAGAGTACCTGGACAGAGTCGAACACCTCAGAGAATACTTAGAAAACAAAGAG
>TU47623
AGAACCGGTGGGACGAGGAAGCTGTGATTTGAAGTGTTTGGTCAAAACTCGTTGTGATTACAATCAAGGCTGACTAATAGTCTGCACTATTGGCAACTGTGGTTAGGTTTAAAAATAACCCTTTTTGTGTCTCCATAAACAGTGCTTAAACGCAGCCAAACAATAGGCCCGTGTAAAGTGACACACGGCGCGGGGTGCGGGCTCGGGCTGACATTGCTGTCGCTCCTGCCAACACATGGGCTCGGCCTGGAGGGAGGAGGGAAAAGCTCAGTCACAAGGAAGCGCCGGCTCTGAAGTAAAAGTGAAATTGGACACAGGCTTAGTGTCGACGTGCAATCAGTGGTTCGCCGGATCCGCTGCCTCGTCTACCCACGTAGCGATGTCGTTCAAGAGTAACACCAATCTGCAGAAAGCGATAAACATTGCCAGCAAAGCCTCTGAGGAAGACAATGCAGAGAACTATGAGGAGGCTATCCGCTTATACCAGCATGCTGTTGGGATCTTCCTACACATAGTCAAACGTGAACCACAGGGGAAAGAAGGCAACCAGAAAATCAGAGAGAAGTGTGCAGAGTACCTGGACAGAGTCGAACACCTCAGAGAATACTTAGAAAACAAAGAGGTTTctg

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0017111 nucleoside-triphosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019869 False 213 mRNA 0.46 2 50963420 50965530
TU47623 True 629 TUCP 0.49 3 50963413 50966929

Neighbor

gene id symbol gene type direction distance location
AMCG00019870 vps4b coding downstream 11041 50945872 ~ 50952372 (-)
AMCG00019868 kdsr,LOC107681813,LOC107727538 coding downstream 19893 50927280 ~ 50943520 (-)
AMCG00019871 NA coding downstream 41887 50920266 ~ 50921526 (-)
AMCG00019862 actr3b,LOC107550018,LOC107664653 coding downstream 453546 50494102 ~ 50509867 (-)
AMCG00019863 NA coding downstream 612169 50345149 ~ 50351244 (-)
G38152 NA non-coding downstream 113246 50845977 ~ 50850167 (-)
G38145 NA non-coding downstream 119773 50830633 ~ 50843640 (-)
G38139 NA non-coding downstream 177397 50784990 ~ 50786016 (-)
G38135 NA non-coding downstream 196004 50766797 ~ 50767409 (-)
G38130 NA non-coding downstream 213955 50748753 ~ 50749458 (-)
AMCG00019866 NA other downstream 251270 50705840 ~ 50712143 (-)
AMCG00019865 LOC102778867,LOC107557236 other downstream 265250 50596196 ~ 50698163 (-)
G37806 LOC100846954,LOC107575789 other downstream 2439711 48522668 ~ 48523702 (-)
AMCG00019824 NA other downstream 3061480 47892203 ~ 47901933 (-)
G37492 NA other downstream 4570315 46365338 ~ 46393098 (-)

Expression


Co-expression Network