G30760



Basic Information


Item Value
gene id G30760
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 522119 ~ 523996 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU38488
TCAGAACCACAGACAGGCAGCTGTGAGGGCTGATGGGAGAACTGGTAGCTGCTGACTGGCTCAGCTGCTGTTTCCACCCACACTGACggacacagacactgactgtAGGGCAGGCAGTGCGTCAGATGGGGGGGTGCTGTTGAAAATGCACCGAGGGACAGGAGAAGGGGAGACGAGACGACACACTGGGGGGCGCCAGAGAGCAGGACAACGCCCTGCTGCACAATCTCAACTTGCCCTCGAACCCGGACTACTGACTGCACACCCtgatgcgcacacacacactgagacgcACTGACTGGTACAGTTTAACACTCTGTTACATGTACTGATTCAGGTgcacattctcacacacactgacatacactcactgatacactgatacaTGTACTGATTCAGGTGTgcattctctcacacacactgatactcccatagataaacacacacaaggcaAATGCACTGACCCCCTACTGCAGCACTGCAGTCCCCCCCACTGTGttcataatcatatttaaagTTTGACTTTTGTTTCTGGCTTTTTGTTTGATCTGATCTGGTTGTTATACGTGTTGTCTGTGGGGGTGgtgtggtgggggtggtgtggtggggggtgtaTCAAATGTTTCGAATGCTTTGGCCCTCACCTTCAATGGAAAGCGTGCCCTGCCCTCGGTCCCTCCGACTCCCTGCCCCCGTCTCTTCCTTCTGGTCTGTGTCCCTCGCTGGGCATTGTAGTGCAGCCCCAGCCCCCAGAGTAACACGGCACCCCCGCCATCCCTCTGACTCCAGAGCCCCGTCTGCCCCTGCTGCGTGAGGGAGGGGTTTCTCTGTCTCGTCCTCTAAcctttcaaaatgcattgtcgggg

Function


NR:

description
PREDICTED: UPF0606 protein KIAA1549L homolog

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU38488 True 866 lncRNA 0.55 2 522119 523996

Neighbor


gene id symbol gene type direction distance location
AMCG00019001 gpaa1 coding downstream 3272 514803 ~ 518847 (-)
AMCG00019003 maf1 coding downstream 25282 478027 ~ 496837 (-)
AMCG00018994 NA coding downstream 103853 416156 ~ 418266 (-)
AMCG00018993 NA coding downstream 110362 405369 ~ 411757 (-)
AMCG00018995 NA coding downstream 131305 382423 ~ 390814 (-)
AMCG00019002 foxh1,LOC108431400,LOC106590409 coding upstream 1759 525755 ~ 534393 (-)
AMCG00019006 NA coding upstream 70779 594775 ~ 609647 (-)
AMCG00019010 NA coding upstream 145387 669383 ~ 670387 (-)
AMCG00019015 NA coding upstream 188874 712870 ~ 723666 (-)
AMCG00019014 NA coding upstream 204069 728065 ~ 737692 (-)
G30612 NA non-coding downstream 107837 413888 ~ 414282 (-)
G30594 sspo non-coding downstream 254192 266073 ~ 267927 (-)
G30593 NA non-coding downstream 262054 259434 ~ 260065 (-)
G30539 NA non-coding downstream 447969 73888 ~ 74150 (-)
G30784 NA non-coding upstream 188716 712712 ~ 733413 (-)
G30797 NA non-coding upstream 310462 834458 ~ 839109 (-)
G30809 NA non-coding upstream 363653 887649 ~ 894190 (-)
G30823 NA non-coding upstream 527089 1051085 ~ 1053885 (-)
G30871 NA non-coding upstream 702834 1226830 ~ 1232565 (-)
G30729 NA other downstream 21930 498732 ~ 500189 (-)
AMCG00018991 NA other downstream 45023 473449 ~ 477096 (-)
AMCG00018992 NA other downstream 67355 452955 ~ 454764 (-)
AMCG00018988 NA other downstream 184486 225374 ~ 337633 (-)
AMCG00018975 kcnh2b,kcnh2,LOC107713341,LOC106590277 other downstream 367594 144253 ~ 154525 (-)
AMCG00019007 LOC106613553,LOC108443229 other upstream 90402 614398 ~ 634293 (-)
G30849 NA other upstream 650528 1174524 ~ 1174983 (-)
AMCG00019024 NA other upstream 651035 1175031 ~ 1177566 (-)
AMCG00019031 LOC107567020,LOC106939174 other upstream 715715 1239711 ~ 1260637 (-)
AMCG00019034 NA other upstream 797618 1321614 ~ 1323596 (-)

Expression



Co-expression Network