G30939


Basic Information

Item Value
gene id G30939
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1581271 ~ 1581489 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38715
tttgaaaagatcaagtcaatacatgcactctctctggttggttccctgacaaattgagttagaaagcagtcatttaccatctcaaccatttctatttctgcttctgtagtccccactgggctttcccagtctatgtttgggaaattgaaatcccccattataacagccacatccttgctacatgcagtcctgattacactgtacaatgcagcatctttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38715 True 219 lncRNA 0.42 1 1581271 1581489

Neighbor

gene id symbol gene type direction distance location
AMCG00019041 NA coding upstream 23406 1554073 ~ 1557865 (+)
AMCG00019040 NA coding upstream 152289 1414610 ~ 1428982 (+)
AMCG00019020 NA coding upstream 397367 1178120 ~ 1183904 (+)
AMCG00019021 NA coding upstream 467052 1098229 ~ 1114219 (+)
AMCG00019016 mafa,LOC107704507 coding upstream 719874 860483 ~ 861397 (+)
AMCG00019050 NA coding downstream 47336 1628825 ~ 1641050 (+)
AMCG00019052 NA coding downstream 62878 1644367 ~ 1658275 (+)
AMCG00019053 nrbp2,nrbp2a coding downstream 149406 1730895 ~ 1740826 (+)
AMCG00019051 LOC106568618 coding downstream 164233 1745722 ~ 1758318 (+)
AMCG00019054 NA coding downstream 180185 1761674 ~ 1762096 (+)
G30937 NA non-coding upstream 28409 1552644 ~ 1552862 (+)
G30910 NA non-coding upstream 165108 1415951 ~ 1416163 (+)
G30903 NA non-coding upstream 171313 1409471 ~ 1409958 (+)
G30887 NA non-coding upstream 270890 1310106 ~ 1310381 (+)
G30878 NA non-coding upstream 324624 1256440 ~ 1256647 (+)
G30996 NA non-coding downstream 356331 1937820 ~ 1938218 (+)
G30943 NA non-coding downstream 457158 2038647 ~ 2083269 (+)
G31104 NA non-coding downstream 515692 2097181 ~ 2099152 (+)
G31117 NA non-coding downstream 595659 2177148 ~ 2177356 (+)
G31141 NA non-coding downstream 607479 2188968 ~ 2209189 (+)
AMCG00019033 NA other upstream 259778 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 327536 1253366 ~ 1253735 (+)
AMCG00019030 NA other upstream 343634 1213676 ~ 1237637 (+)
AMCG00019029 NA other upstream 382176 1197986 ~ 1199095 (+)
G30698 NA other upstream 580058 995327 ~ 1001213 (+)
AMCG00019046 NA other downstream 4336 1585825 ~ 1605545 (+)
AMCG00019064 NA other downstream 280340 1861829 ~ 1885551 (+)
G31110 NA other downstream 560341 2141830 ~ 2147563 (+)
AMCG00019089 NA other downstream 938615 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 1512963 3094452 ~ 3100171 (+)

Expression


Co-expression Network