G30943


Basic Information

Item Value
gene id G30943
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2038647 ~ 2083269 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38724
CTATATCACACCAGTACCAGCCTTGGTCCTCCGGCCGCAGTCCGCTCACAGTCACACTGAAGAGTCCCTCCGCTGTGTGGTCAGTGATCAGGACAGAGCCGTGTCCTGCAGTCCGCTCACAGTCACACTGAAGAGTCCCTCCGCTGTGTGGTCAGTGATCAGGACAGAGCCGTGTCCTGCAGTCCCAGGGCTTCCTGCTGTCTGACAGGAGCTCCAGTCTCCACTCCTGCACCTCTGTTTCTGTCTGGACCGGTATGGGTGTCCATATCGACACTGGACACTGACCTCCCCTCCTATCTGTCCTGTTACTGTGGCATTGACCACATATGGCACCCCAGCGTCTGCAGACAGAGACATTAAACACATACAGAGCTTTACAGCAGTGCGTTGCGGCCGCTGGGCTGCTAATTCACTTCAGCAGTTACACAGCAGGCTCTTCTCCTACAGGCGTCTATAGGCCAACTGACCATCATGAGAAGAGTCACGTTCCTCACACTCAACAGCCTGGCGTCGGGTCAGGCCatggggagaacagcaaacagcacacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38724 True 551 lncRNA 0.56 2 2038647 2083269

Neighbor

gene id symbol gene type direction distance location
AMCG00019062 NA coding upstream 4233 2031254 ~ 2034414 (+)
AMCG00019063 NA coding upstream 8071 2017146 ~ 2030576 (+)
AMCG00019060 NA coding upstream 58150 1975590 ~ 1980497 (+)
AMCG00019056 klhl18,LOC107657445,LOC107733883,LOC107701005,LOC107730797 coding upstream 186278 1842788 ~ 1852369 (+)
AMCG00019057 NA coding upstream 207370 1783777 ~ 1831277 (+)
AMCG00019068 NA coding downstream 86807 2170076 ~ 2174807 (+)
AMCG00019072 NA coding downstream 94658 2177927 ~ 2188659 (+)
AMCG00019075 NA coding downstream 197373 2280642 ~ 2291671 (+)
AMCG00019076 NA coding downstream 282337 2365606 ~ 2369242 (+)
AMCG00019081 abcf2,LOC106590172 coding downstream 292726 2375995 ~ 2378374 (+)
G30996 NA non-coding upstream 100429 1937820 ~ 1938218 (+)
G30939 NA non-coding upstream 457158 1581271 ~ 1581489 (+)
G30937 NA non-coding upstream 485785 1552644 ~ 1552862 (+)
G30910 NA non-coding upstream 622484 1415951 ~ 1416163 (+)
G30903 NA non-coding upstream 628689 1409471 ~ 1409958 (+)
G31104 NA non-coding downstream 13912 2097181 ~ 2099152 (+)
G31117 NA non-coding downstream 93879 2177148 ~ 2177356 (+)
G31141 NA non-coding downstream 105699 2188968 ~ 2209189 (+)
G31143 NA non-coding downstream 108152 2191421 ~ 2192208 (+)
G31217 NA non-coding downstream 320857 2404126 ~ 2409887 (+)
AMCG00019064 NA other upstream 153096 1861829 ~ 1885551 (+)
AMCG00019046 NA other upstream 433102 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 717154 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 784912 1253366 ~ 1253735 (+)
AMCG00019030 NA other upstream 801010 1213676 ~ 1237637 (+)
G31110 NA other downstream 58561 2141830 ~ 2147563 (+)
AMCG00019089 NA other downstream 436835 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 1011183 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 1107343 3190612 ~ 3210890 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 2236327 4319596 ~ 4368203 (+)

Expression


Co-expression Network