G30996


Basic Information

Item Value
gene id G30996
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1937820 ~ 1938218 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38814
CCATACTTTACACTGTTCACCGCGTGCTTAATTAGCCTGCCTTGTGTGTGGCCTCCTCTAGGACAGTCCTGTATTGCTTGGTGGATATCTTCTGTCCCACACTGTGTGATCACGAGTGGTGATGTTATAactcaataaaatgtttttacaaggCCTCTGCTTGCCTCTTGTTTTTACTGCTGTGTCTCCTGAGCTGTACCGCTGACAAACCGCAGTACGTGACAGGTGTAGCTTTCCTGGGGTGACACAGTGGGGTGTGTCAAAGAGTTCAGCTGTGCTGAGGTGAAGTAACACAGTGTGGAGGTCTGTTTTCAGATCTGATACGAGGGCCTCAGGTTAGACACAACTTTcaaac

Function

GO:

id name namespace
GO:1901607 alpha-amino acid biosynthetic process biological_process
GO:0008652 cellular amino acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38814 True 355 lncRNA 0.48 2 1937820 1938218

Neighbor

gene id symbol gene type direction distance location
AMCG00019056 klhl18,LOC107657445,LOC107733883,LOC107701005,LOC107730797 coding upstream 85451 1842788 ~ 1852369 (+)
AMCG00019057 NA coding upstream 106543 1783777 ~ 1831277 (+)
AMCG00019054 NA coding upstream 175724 1761674 ~ 1762096 (+)
AMCG00019051 LOC106568618 coding upstream 179502 1745722 ~ 1758318 (+)
AMCG00019053 nrbp2,nrbp2a coding upstream 196994 1730895 ~ 1740826 (+)
AMCG00019060 NA coding downstream 37372 1975590 ~ 1980497 (+)
AMCG00019063 NA coding downstream 78928 2017146 ~ 2030576 (+)
AMCG00019062 NA coding downstream 93036 2031254 ~ 2034414 (+)
AMCG00019061 NA coding downstream 123499 2061717 ~ 2062756 (+)
AMCG00019068 NA coding downstream 231858 2170076 ~ 2174807 (+)
G30939 NA non-coding upstream 356331 1581271 ~ 1581489 (+)
G30937 NA non-coding upstream 384958 1552644 ~ 1552862 (+)
G30910 NA non-coding upstream 521657 1415951 ~ 1416163 (+)
G30903 NA non-coding upstream 527862 1409471 ~ 1409958 (+)
G30887 NA non-coding upstream 627439 1310106 ~ 1310381 (+)
G30943 NA non-coding downstream 100429 2038647 ~ 2083269 (+)
G31104 NA non-coding downstream 158963 2097181 ~ 2099152 (+)
G31117 NA non-coding downstream 238930 2177148 ~ 2177356 (+)
G31141 NA non-coding downstream 250750 2188968 ~ 2209189 (+)
G31143 NA non-coding downstream 253203 2191421 ~ 2192208 (+)
AMCG00019064 NA other upstream 52269 1861829 ~ 1885551 (+)
AMCG00019046 NA other upstream 332275 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 616327 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 684085 1253366 ~ 1253735 (+)
AMCG00019030 NA other upstream 700183 1213676 ~ 1237637 (+)
G31110 NA other downstream 203612 2141830 ~ 2147563 (+)
AMCG00019089 NA other downstream 581886 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 1156234 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 1252394 3190612 ~ 3210890 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 2381378 4319596 ~ 4368203 (+)

Expression


Co-expression Network