G31064 (klhl18,LOC107657445)


Basic Information

Item Value
gene id G31064
gene name klhl18,LOC107657445
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1849538 ~ 1851593 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38891
GAGCTTTAAATCATGTATTAAAATGAACGTTTGTGTTCTGCagttcatttgtttaatgtttcacACTCCTCTCCCAGGAGGTAGATACAGAGCTGTGCGCAGACAGGGCAGTGACTGATCCGCTCACTATACCACACTcgtacagcaacaacaacagtcatcatcatattaatcatcacaataataaatCTTTACAGGCTGCTGGTTATTCCAAACCGTTAtgtgcaacagaaaaaaaaaacattagagaaggaaataaaaataaatattacagtttGAGGTACAGTACCAAAAGAGTAGTAAAAATAATGGAATCATTGTGAATGCaaggaaataattattaataacaacagtGCATAACATATGTATAATTACTTAgaacaataacaatgataacaataatgataattcCTAGAAGTTTCACAGTATTCTTTCCCCACTAGGATCCTGTTACACATCTTTTTTGCCGGATCTCAGATTTGCCTCAAAACACATCCAATTCACcgacagaaaaacaaagtccTCTGTTCCCCTCGATATGCCCACTGTCAATGCCCCTGTCCTGTGCtgcgttttatttttggtgcagAAGATGTTGGAGGCTTGGGAGGAGGGGGAGCCCACAGACAGGAGAGCCAGGCCCCACACCGGCAGCAGGACAGTGAGGAACACGCCATGGAAGTCCCCTCCAGTCCAGTCGGAGAAGAAGAGACCGACACTGTGCCGTGTATGTGGAGCGCTTCGTGTGCCTGTGTGCGTCTCCGCTCGGCCGGCAGGCATGAGGGTTTTCCTGAGGTGAGGTTGATAgctttttctcttctctgttgTTTTTATCCGTTGTCTGAAAGGATGGATCATGACGTGAGTAACAAGCTCAGGGGGGCGGCTTTTGTTTCAATTGTCCTTCTATTGAGCACTTGAGCAGTACGACCGTGTGCTGCACTTTGCACGACTGGAGACAACCAGGACCCAGAGGGGACAGCACACAGCCGGCTACTGTTTGGAGGTCTTCACCGCAGGCTGCCGTGAGTGCAGAGAGGACTCGGAGTCGGCCGTGTGCGTCCAATCACAATCACTCTCATCGGATACCATACCACATCAGTGCCTTCCTTCCCCAAGTCATAGACCCCACAATCCCCATCCCTCCTCCCACAGCGGGCAGACCTTCACATCCTCCTGTTCTGTGCCTCTGGCAGACGCTGAAGTCACCCCCCCTTGGCCGAGCCCCATGTCCCAGTCAGTTCTGCGGGGGCGCCGGGAGGCTGAGGCCCTGCCAGAGGGCGATGgcagcaccacacacacacacaNNNNNNNNNNcacacacacacacacaggccaagTGTGGGCCTCTGATATCAGTCACAccctccacccccacacaccagtgggcaggagagagagagagagaggagctctgtgtgtagtgtttgtgtACAACTCCCTCTTTGTCAGTTTAATAGATCCCATTTAACAacacaccccccacctccctctctgAGGAACACCTGCTGTCTGTGGAAtgattttctttcctctctctctctcccactgcaCTTGTGTTTCACATcattatgtaaaaacaaaccaacaacaacaaacaagagaaacacggggggaggaggagaggccAGGAGGGCGGGGGGCGGGCCGGGGCAGGGCTAGGCCGGCAGCAGAGGCACGCAGCCCACGCCCACGCCACCCTCGTGACACACCATGGGCGCCATGAAGGTCCAGCAGTTGGTCTCGCCGTCGTACATCTCCACCGAGTTCAGGTTGGACTGGCCGTCGTAGCCGCCCACCGCATACAGCCGGCCGCAGTTGGCCACCAGGGAGACGCGGCTGCGGCGAGTGTTCATGGCCACCACATGGCTCCACTGGTCGGCGATGGAGCTGTACACCTCCACCCCGCTCAGGAAGCCCGAGCCGTCGTAGCCCCCGGCCACGTACAGCCTGCTGCCCAGGGCTGCGGCACCGTGCCGACAGCGCTTGTTCATCATGGCTGCCACTGGGTGCCAGGTGGCCGTGTGATGGTT

Function

symbol description
klhl18 Orthologous to human KLHL18 (kelch like family member 18).

NR:

description
PREDICTED: kelch-like protein 18

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38891 True 2033 lncRNA 0.53 2 1849538 1851593

Neighbor

gene id symbol gene type direction distance location
AMCG00019058 NA coding downstream 8052 1833471 ~ 1841486 (-)
AMCG00019055 NA coding downstream 148988 1685165 ~ 1700550 (-)
AMCG00019047 NA coding downstream 221416 1624468 ~ 1628122 (-)
AMCG00019048 NA coding downstream 231847 1616748 ~ 1617691 (-)
AMCG00019049 NA coding downstream 232837 1608998 ~ 1616701 (-)
AMCG00019067 NA coding upstream 86952 1938545 ~ 1957060 (-)
AMCG00019066 NA coding upstream 134512 1986105 ~ 2011157 (-)
AMCG00019065 NA coding upstream 168772 2020365 ~ 2030234 (-)
AMCG00019070 NA coding upstream 187106 2038699 ~ 2049084 (-)
AMCG00019069 NA coding upstream 245391 2096984 ~ 2098809 (-)
G31038 nrbp2,LOC108267406,LOC108413492 non-coding downstream 115951 1732585 ~ 1733587 (-)
G31018 NA non-coding downstream 258817 1589579 ~ 1590721 (-)
G30932 NA non-coding downstream 343621 1505564 ~ 1505917 (-)
G30900 NA non-coding downstream 491375 1357308 ~ 1358163 (-)
G30871 NA non-coding downstream 616973 1226830 ~ 1232565 (-)
G31074 NA non-coding upstream 18778 1870371 ~ 1881183 (-)
G31075 NA non-coding upstream 21152 1872745 ~ 1874348 (-)
G31021 NA non-coding upstream 124111 1975704 ~ 2061961 (-)
G31137 NA non-coding upstream 324569 2176162 ~ 2176966 (-)
G31218 NA non-coding upstream 552821 2404414 ~ 2409880 (-)
G31035 NA other downstream 138995 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 525942 1321614 ~ 1323596 (-)
AMCG00019031 LOC107567020,LOC106939174 other downstream 588901 1239711 ~ 1260637 (-)
AMCG00019024 NA other downstream 671972 1175031 ~ 1177566 (-)
G30849 NA other downstream 674555 1174524 ~ 1174983 (-)
AMCG00019059 NA other upstream 30861 1882454 ~ 1896432 (-)
G31082 NA other upstream 80748 1932341 ~ 2083271 (-)
G31130 NA other upstream 326387 2177980 ~ 2178650 (-)
AMCG00019109 NA other upstream 2368850 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 3080756 4932349 ~ 4940667 (-)

Expression


Co-expression Network