G31074


Basic Information

Item Value
gene id G31074
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 1870371 ~ 1881183 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38907
CTGAACACAGTCCGGTACTTCTGCTCTGATCTCTTCTGTTCCAGTGAAAACAGACTGATCGAGACAACAGGGttggaaaagaacaaaacacagacacagggatgAAGTGGAGGATTCCCACTGCCTACCTCGTGTGGGGAGTCCTTGTCCTCTGTGTGTCCGGCCTCCTTCTGCAGTGGAGCCTGNNNNNNNNTGACACACCTCCACACTTCTTCGGGTTGGCTGGAGTTTCCACTCAATCCAATTCTATAGCCGAAACATTGTTGCTCTGTTGACTNNNNNNNNGAGTCCTTGTCCTCTGTGTGTCCGGCCTCCTTCTGCAGTGGAGCCTGCAGGGAGTAAACAGCAGGGCTTAGTGTAATGTCGTAGAGACCTGTAGACACAACTTGAGGAATCgcttattaatgttttaaagcaCACATTAAAGCTGTAATTGATTTCCCTCCTTATTTTGATGATTGATAATAAAAGTGGAAGTTGACAATGGTgaagttacatttttttgaatTTATGAAGTAAGTGTTGAGcaaactttgtattttgtcattgaaTTTACATGACACTACCAAGATGCCATTTTGACATATCAAGTTTCCTGTAGTTGAAGTTTACAGTATCTCTTACAGGGCATTTGTTAATTAATCATCTTCaggtttattttcataattgaaaGATGTTTGACATACTTGAGCGGACAATTACACCACTGTTGTGTCATAGGCAGTAAagacacatatgtatataacaaGGTTTATTGAGTAACTATGTACAGTTGCTGCTCCTCCTTCGTACTGCATAGAActcacttttttccctttttcctgCTGGTATCTAGACATAGTGACATCTACTGACGCTACATAGTACGACATCACAGCCACCCAGTACGAAAGCAAATACTGGCATCATGTTGGATTTtggaaacaacatttaaaatgtgcacatttgAATGGACATTGGAATAGATatccatgttttttgtttccttttgaacCGTTACAATAATGTCATCTAGTTGGACATTTCCTAAGAACAACACACGGTAACTTATTGtacattaacatatattttctatttgacgtttattttttgtgtaccTGGGAAACCATGTACACACACTTCTTTTCTAACAAATTGTTAGCTTAGTTAGATTTTTGACCGTCATCTGGTATCACCTGTTGCGGGGAACTCCTGAACTTTTTCTAAGAATAGAGAAATGCTACGATACTACACATGGTCAGAGTATAATACAGAGGGgttgtattgtgtatatttgggtggcagtgtggag

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU38907 True 1291 lncRNA 0.39 3 1870371 1881183

Neighbor

gene id symbol gene type direction distance location
AMCG00019058 NA coding downstream 28885 1833471 ~ 1841486 (-)
AMCG00019055 NA coding downstream 169821 1685165 ~ 1700550 (-)
AMCG00019047 NA coding downstream 242249 1624468 ~ 1628122 (-)
AMCG00019048 NA coding downstream 252680 1616748 ~ 1617691 (-)
AMCG00019049 NA coding downstream 253670 1608998 ~ 1616701 (-)
AMCG00019067 NA coding upstream 57362 1938545 ~ 1957060 (-)
AMCG00019066 NA coding upstream 104922 1986105 ~ 2011157 (-)
AMCG00019065 NA coding upstream 139182 2020365 ~ 2030234 (-)
AMCG00019070 NA coding upstream 157516 2038699 ~ 2049084 (-)
AMCG00019069 NA coding upstream 215801 2096984 ~ 2098809 (-)
G31064 klhl18,LOC107657445 non-coding downstream 18778 1849538 ~ 1851593 (-)
G31038 nrbp2,LOC108267406,LOC108413492 non-coding downstream 136784 1732585 ~ 1733587 (-)
G31018 NA non-coding downstream 279650 1589579 ~ 1590721 (-)
G30932 NA non-coding downstream 364454 1505564 ~ 1505917 (-)
G30900 NA non-coding downstream 512208 1357308 ~ 1358163 (-)
G31021 NA non-coding upstream 94521 1975704 ~ 2061961 (-)
G31137 NA non-coding upstream 294979 2176162 ~ 2176966 (-)
G31218 NA non-coding upstream 523231 2404414 ~ 2409880 (-)
G31234 NA non-coding upstream 593501 2474684 ~ 2474983 (-)
G31236 NA non-coding upstream 598755 2479938 ~ 2480415 (-)
G31035 NA other downstream 159828 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 546775 1321614 ~ 1323596 (-)
AMCG00019031 LOC107567020,LOC106939174 other downstream 609734 1239711 ~ 1260637 (-)
AMCG00019024 NA other downstream 692805 1175031 ~ 1177566 (-)
G30849 NA other downstream 695388 1174524 ~ 1174983 (-)
AMCG00019059 NA other upstream 1271 1882454 ~ 1896432 (-)
G31082 NA other upstream 51158 1932341 ~ 2083271 (-)
G31130 NA other upstream 296797 2177980 ~ 2178650 (-)
AMCG00019109 NA other upstream 2339260 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 3051166 4932349 ~ 4940667 (-)

Expression


Co-expression Network