G31104


Basic Information

Item Value
gene id G31104
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2097181 ~ 2099152 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38952
aattcctAGTGAAAAGGGATGTTAATACAGATAAGATTACTCAGGCAGTGATGGAATTCAATCAGATTTATTTAAGAATCCAATCCAATAAATGAAcatgaataaattaacaattacattatttacaatatcAGTGCAGCTCTTTGTGTGGCGATGGTGTGCTGCCATGACTGGGTTCCTTGTTCTCATCCAAACAGGCTCCAGAAGTCAGGGGTTGCCTCCAGTTCTTGCGCTCCGCTGGGTCTGTGACCTCGACACACGTCACGGCCACAGTGTCCGCCTCGCCGGGCCTCTGCTTCGCGACAGTGACGATCGAACTGCACTTCAGCAGAGCCATTCTCCTTGTAGGCACATTCCTCCTTCTTATAGTCCACGGATTTGGGGCACAGCGTCTCTTTCAGAGTGAACCTTATGGTATATTCAGTTGAAGAGCCGTCACCCGGAATGAACATCGACCATCCCCAGCAGTGGACTTTTCTGCGGAGGTTTGAAAGCTTTGCTCTCCTTGCTGATCTGGTTGTAATGAGCCGTGGCTGCAGAGAGGGCGTCCCCGAAACCGAAGGTGCTCTTGGCCAGAGACACAGGGGCCAGGACGGCCAGGGCGAGCAGCAGGGTTACAGCAGACATCCTCGTCCTGTTGGGTAGTCCTTCACTCTGAGCTGGGAGCGGTGCGGTGGGACAGAGGGGCCTGCCTTTTAAACCCTCGCAGCTTGTCCGCTGCAGATTGAGCAACACAAGGGAGCACAGGGGCTGGCAATCCAGCGCTGGGAATTTCCACACTCGACGCGATCTGCTGGGAAATGCAGTCGGATGTATGTACTCTATCTAAATGTCAACACCAGAACTTTTGTATAGGTTAGATAAACAACGGCGAATTGAGTTTTATTTACCAGTCCCAGCAATCCAATATTGTTTGATAAAGTGAACAGATTgttgtattttgcaattatcTGGTAATGTATAAACAACAATAGTCTTTAGCTAAGAAAAACTCATCTGGATTCTTCatggaaacaatgaaaatattttcacacacaaaaaaattgcTTCTTCACCTggggtataataataattaataat

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU38952 True 1080 lncRNA 0.47 4 2097181 2099152

Neighbor

gene id symbol gene type direction distance location
AMCG00019061 NA coding upstream 34425 2061717 ~ 2062756 (+)
AMCG00019062 NA coding upstream 62767 2031254 ~ 2034414 (+)
AMCG00019063 NA coding upstream 66605 2017146 ~ 2030576 (+)
AMCG00019060 NA coding upstream 116684 1975590 ~ 1980497 (+)
AMCG00019056 klhl18,LOC107657445,LOC107733883,LOC107701005,LOC107730797 coding upstream 244812 1842788 ~ 1852369 (+)
AMCG00019068 NA coding downstream 70924 2170076 ~ 2174807 (+)
AMCG00019072 NA coding downstream 78775 2177927 ~ 2188659 (+)
AMCG00019075 NA coding downstream 181490 2280642 ~ 2291671 (+)
AMCG00019076 NA coding downstream 266454 2365606 ~ 2369242 (+)
AMCG00019081 abcf2,LOC106590172 coding downstream 276843 2375995 ~ 2378374 (+)
G30943 NA non-coding upstream 13912 2038647 ~ 2083269 (+)
G30996 NA non-coding upstream 158963 1937820 ~ 1938218 (+)
G30939 NA non-coding upstream 515692 1581271 ~ 1581489 (+)
G30937 NA non-coding upstream 544319 1552644 ~ 1552862 (+)
G30910 NA non-coding upstream 681018 1415951 ~ 1416163 (+)
G31117 NA non-coding downstream 77996 2177148 ~ 2177356 (+)
G31141 NA non-coding downstream 89816 2188968 ~ 2209189 (+)
G31143 NA non-coding downstream 92269 2191421 ~ 2192208 (+)
G31217 NA non-coding downstream 304974 2404126 ~ 2409887 (+)
G31351 NA non-coding downstream 977764 3076916 ~ 3077156 (+)
AMCG00019064 NA other upstream 211630 1861829 ~ 1885551 (+)
AMCG00019046 NA other upstream 491636 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 775688 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 843446 1253366 ~ 1253735 (+)
AMCG00019030 NA other upstream 859544 1213676 ~ 1237637 (+)
G31110 NA other downstream 42678 2141830 ~ 2147563 (+)
AMCG00019089 NA other downstream 420952 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 995300 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 1091460 3190612 ~ 3210890 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 2220444 4319596 ~ 4368203 (+)

Expression


Co-expression Network