G31110


Basic Information

Item Value
gene id G31110
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2141830 ~ 2147563 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU38960
AGGGAGTATCTGGGGGGAGTTACTGTTCTGCAGGCTGGAGGGAGCTGAGGGGCCACAGAGCCCAGTCCTCAGATCTGCTGCTCCCCCAGCGCTGAGAGGAAGATGAACCAACTGCTGCCTGTGCTGCTGCTCACTGCAGGGGCCCTGCTGGCCCCCACCGAGGGGCAGGAAGAGTACGACAAACTGCCTGATGATTTCAAGATAGGAGTCGATTGGGCCCTTGAAACGTTCAATTCCCAAATGAACAATAAACTGCTTTACCTTTTCTTCAAAAGCCAGACCAGGTCGGAAAAAGAGGAGATGAAGGACAGTCGACATCAGCACTGTGAGGAGACTAAGAAGGACTACAGTCCAGGTCAGTTGGTCAGTCTTGCATCAACTGGCCTTCATAGCTCCTAGGGAAGAGGTGGTGGAGGGGGGCGAAACAAGAGGGCACAGAGAATCCCCAGACTTCCCCCCCATCAGTCTGAAGTGGCAGAAGATGGCACCTGAGAGCATTGCTGCTGTCTGTGCTGGGACCCCAGGGGGGATTGTTCTCCATCTTCATGATATGTGTTTCAAGATAAGAACAGTCAGGAGacgtgctgctgtgtgtgtctgtctctgtgtcgcTCTGCCGTGGCTGTGTGACGCCCACTATGGCCAAAAAAGCATCTCTCTGTGCTGTTCAGCTGTGATTCATAGTGTATATTCATGATGATATATCTGATATTGTATGCTGTCATTATAGAGACACTGTGATAATGTTACCCTGTAATATATgcaacaattacaataaagatTCACAACAATGCCAcactgtaataaatgtaattattactaTATACTGTCACTATGACGTT
>TU38962
CTGCCCCTCGGTGGGGGCCAGCAGGGCCCCTGCTGCTCCCCCAGCGCTGAGAGGAAGATGAACCAACTGCTGCCTGTGCTGCTGCTCACTGCAGGGGCCCTGCTGGCCCCCACCGAGGGGCAGGAAGAGTACGACAAACTGCCTGATGATTTCAAGATAGGAGTCGATTGGGCCCTTGAAACGTTCAATTCCCAAATGAACAATAAACTGCTTTACCTTTTCTTCAAAAGCCAGACCAGGTCGGAAAAAGAGGAGATGAAGGACAGTCGACATCAGCACTGTGAGGAGACTAAGAAGGACTACAGTCCAGGTCAGTTGGTCAGTCTTGCATCAACTGGCCTTCATAGCTCCTAGGGAAGAGGTGGTGGAGGGGGGCGAAACAAGAGGGCACAGAGAATCCCCAGACTTCCCCCCCATCAGTCTGAAGTGGCAGAAGATGGCACCTGAGAGCATTGCTGCTGTCTGTGCTGGGACCCCAGGGGGGATTGTTCTCCATCTTCATGATATGTGTTTCAAGATAAGAACAGTCAGGAGacgtgctgctgtgtgtgtctgtctctgtgtcgcTCTGCCGTGGCTGTGTGACGCCCACTATGGCCAAAAAAGCATCTCTCTGTGCTGTTCAGCTGTGATTCATAGTGTATATTCATGATGATATATCTGATATTGTATGCTGTCATTATAGAGACACTGTGATAATGTTACCCTGTAATATATgcaacaattacaataaagatTCACAACAATGCCAcactgtaataaatgtaattattactaTATACTGTCACTATGACGTT

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU38960 True 842 TUCP 0.49 2 2143921 2147563
TU38962 False 797 TUCP 0.49 3 2141830 2147563

Neighbor

gene id symbol gene type direction distance location
AMCG00019061 NA coding upstream 79074 2061717 ~ 2062756 (+)
AMCG00019062 NA coding upstream 107416 2031254 ~ 2034414 (+)
AMCG00019063 NA coding upstream 111254 2017146 ~ 2030576 (+)
AMCG00019060 NA coding upstream 161333 1975590 ~ 1980497 (+)
AMCG00019056 klhl18,LOC107657445,LOC107733883,LOC107701005,LOC107730797 coding upstream 289461 1842788 ~ 1852369 (+)
AMCG00019068 NA coding downstream 22513 2170076 ~ 2174807 (+)
AMCG00019072 NA coding downstream 30364 2177927 ~ 2188659 (+)
AMCG00019075 NA coding downstream 133079 2280642 ~ 2291671 (+)
AMCG00019076 NA coding downstream 218043 2365606 ~ 2369242 (+)
AMCG00019081 abcf2,LOC106590172 coding downstream 228432 2375995 ~ 2378374 (+)
G31104 NA non-coding upstream 42678 2097181 ~ 2099152 (+)
G30943 NA non-coding upstream 58561 2038647 ~ 2083269 (+)
G30996 NA non-coding upstream 203612 1937820 ~ 1938218 (+)
G30939 NA non-coding upstream 560341 1581271 ~ 1581489 (+)
G30937 NA non-coding upstream 588968 1552644 ~ 1552862 (+)
G31117 NA non-coding downstream 29585 2177148 ~ 2177356 (+)
G31141 NA non-coding downstream 41405 2188968 ~ 2209189 (+)
G31143 NA non-coding downstream 43858 2191421 ~ 2192208 (+)
G31217 NA non-coding downstream 256563 2404126 ~ 2409887 (+)
G31351 NA non-coding downstream 929353 3076916 ~ 3077156 (+)
AMCG00019064 NA other upstream 256279 1861829 ~ 1885551 (+)
AMCG00019046 NA other upstream 536285 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 820337 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 888095 1253366 ~ 1253735 (+)
AMCG00019030 NA other upstream 904193 1213676 ~ 1237637 (+)
AMCG00019089 NA other downstream 372541 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 946889 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 1043049 3190612 ~ 3210890 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 2172033 4319596 ~ 4368203 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 3783141 5930704 ~ 5939597 (+)

Expression


Co-expression Network