G31143


Basic Information

Item Value
gene id G31143
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2191421 ~ 2192208 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU39001
aaaaaaaaatgaacacgcAACATATCTTCAGTAACACACCTATAGAAAggtagtaataattaaaaaaaatcataataaacacatgtaaCACCACTCCTTTAAAAGGTCATTGAGTGAGTAAAAGTCCCTGGGGGTCGCGACCCCAGGCCTCAGTCCGTCAGGTGCTCCAGTTGGCTGGGTGGCCCTTCTGGGGGCGAGTTCACTTTCTGAAAGGCTCCTCCCCCCACAGCcatggagagggaggggagtggGCGTGTCCTGCAAGCCCCCCACCCTCCGCAGTGGGCGGGGCTAGTCCGAGTCCGAGTCGCTGGTCTCTTCTGTGGAtgagctgctgctgccctctgaTTGGTCCTCGTCATCTTCGCCCTCCTCGTCTTCCTCGTCCTCCTCGTCGTCGTTCTCCTCGTCCTCGCTGTCCGAGCTGCCTGAGGActcttcctcatcctcctcttcctctgagTCTGAGGAGTctgtcttctcctcctcctcctcctcagagtCCGAGGTGTCCTGGGGCGCAGGGGGCACAGTCAGCTTCCCTTTTCCCTCCAATTATTTCACAGCcgcccatacacacacactaacattcGAGCGCATCGTTCTCACCGGCTGGCCCTAGAAatcgcacgcacgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39001 True 639 lncRNA 0.56 2 2191421 2192208

Neighbor

gene id symbol gene type direction distance location
AMCG00019072 NA coding upstream 2762 2177927 ~ 2188659 (+)
AMCG00019068 NA coding upstream 16614 2170076 ~ 2174807 (+)
AMCG00019061 NA coding upstream 128665 2061717 ~ 2062756 (+)
AMCG00019062 NA coding upstream 157007 2031254 ~ 2034414 (+)
AMCG00019063 NA coding upstream 160845 2017146 ~ 2030576 (+)
AMCG00019075 NA coding downstream 88434 2280642 ~ 2291671 (+)
AMCG00019076 NA coding downstream 173398 2365606 ~ 2369242 (+)
AMCG00019081 abcf2,LOC106590172 coding downstream 183787 2375995 ~ 2378374 (+)
AMCG00019082 chpf2,LOC106590171 coding downstream 199499 2391707 ~ 2402129 (+)
AMCG00019083 NA coding downstream 295134 2487342 ~ 2488988 (+)
G31117 NA non-coding upstream 14065 2177148 ~ 2177356 (+)
G31104 NA non-coding upstream 92269 2097181 ~ 2099152 (+)
G30943 NA non-coding upstream 108152 2038647 ~ 2083269 (+)
G30996 NA non-coding upstream 253203 1937820 ~ 1938218 (+)
G30939 NA non-coding upstream 609932 1581271 ~ 1581489 (+)
G31217 NA non-coding downstream 211918 2404126 ~ 2409887 (+)
G31351 NA non-coding downstream 884708 3076916 ~ 3077156 (+)
G31380 NA non-coding downstream 947479 3139687 ~ 3165672 (+)
G31430 NA non-coding downstream 1152547 3344755 ~ 3345244 (+)
G31432 NA non-coding downstream 1161132 3353340 ~ 3388685 (+)
G31110 NA other upstream 43858 2141830 ~ 2147563 (+)
AMCG00019064 NA other upstream 305870 1861829 ~ 1885551 (+)
AMCG00019046 NA other upstream 585876 1585825 ~ 1605545 (+)
AMCG00019033 NA other upstream 869928 1318622 ~ 1321493 (+)
G30877 arhgap39,LOC106560380,LOC106584197 other upstream 937686 1253366 ~ 1253735 (+)
AMCG00019089 NA other downstream 327896 2520104 ~ 2618052 (+)
AMCG00019096 LOC107727496 other downstream 902244 3094452 ~ 3100171 (+)
AMCG00019100 crem,crema,LOC105019435,LOC106578540,LOC108428923,LOC103396770 other downstream 998404 3190612 ~ 3210890 (+)
AMCG00019111 phlpp1,LOC106599727,LOC103135813,LOC101477421,LOC106925929,LOC102225687,LOC103479552 other downstream 2127388 4319596 ~ 4368203 (+)
AMCG00019154 ghrhrb,LOC107704523,LOC106560417,LOC107717144,LOC107556991 other downstream 3738496 5930704 ~ 5939597 (+)

Expression


Co-expression Network