G31245


Basic Information

Item Value
gene id G31245
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 2494716 ~ 2496567 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU39125
CTTCTTGCGCTCCTTCTCCAGCGCCCTCCACTGCTCGTAGCACACCTCCAACTGCGTGTGCAGCTCGTTGGCCGGGCCGCTGCGGTTCCTCATGGGCCGGTACTTGTTGAAAGGGGGAGGGAAGCCGAAATAGGGGGGGGGCACGTCTCCACAGAACACCTCACCAACGAAGGGGCTCAGGCGGCCAAAGTCCTCATACTGCAGGAGGTCCATGAGGTCAGGGAAGGGGAACCCGGAGGGGGGGAACGGGAAACCACCCCCGCCGCCCCCGCCGCCCCCCCCGCTGCCGCTGTGGGGGCTGAACTGGGAGAAGCCGTGGCTCCGCTTCAGGTCCGACATCCCGAGGGGGAAgggcggcaggaactgggagttGACATAGTCGGACACGTGGCCCCCATCCGGGTCCTGCTTCCTGCGGTAGCTGTTGTACTGTTGGCGGCCGGGGCCTCCATACTGGGGCGGAGGGAACCAgtggttgttattgttgtggttgtggttgttcTTCCTCGCAGCCTTCCTGTCATCGCGGCTCTCCCAGCAGGGCCGGCCACGGTGCGGGTAGCCTCGGTCTGGCTCTTCCCCCGGAGAAGTCTGGGCCGGCGGGGGCCCCCAGTTGCTGGGAAAGCCGGACTGGTTGCCATACGGGTGCTCTTTGGTCGCTGCCGGGTCTAGTCTGGAGTGGCCGCCAGGCGGGCTCTGATTCGTGTGTTCGGACCCTGCGTTTCCTGGCCAGCACCCAGGGCGGATCTCTCCCGGTTTGCCCCTCCGTTCCGTTTTCCCACCTGGAGACACCGGGGACGTCTGCGAGGAATACGGCGGTGGGTGGAAAAGGCCGACGGGGTTTTCACTCGAGAGGTTGGGCACACCCGAGAGGGAAACCTGCAGGCTGCCCACCGAGCTCTTCTGCCCCCCGTACCGCGAGGCCGGCTTCCCCGATGGGCTCAGCATACCCCcgtcagaccacacgggcccgTTCTTCGCTGGCTGCGGGTAGTCCCCATTCTGGAGCATGGCACTCATGGCCCGGGCAAAGTCAGAAGGCAGATCCAATGCCCCGGGCAGGACCTGATCGCTGGGTTTCCGCGAGGGAAGATACGCATCTTGAGCGCCAAGGTTGAGATCGGGAGGCGGCTGCCAGCTCCTGCCCCCGCTCAGCTTGCTGCGCTGCTGACCGAAGTAGTGCCGAGGTGGGGGGAAGGACTTCTTCAGAGACAAGGGGGAGTTATAGTCCTCGTACCCCTGGAAGGAGTGTTGCCTCCGCGGCGGCACCTGCGCCCAGCTGTCCCCGGCGGACGGGCCGCTCAGATCCGCGCAGAAGCCTCCGGGATCCGCGGGCCCACCCTGACCGGAGAACTTCTCTCGGCCCTGCTCCGCTCTGAACTGCATCCGCCCGTTGCTGCCATTGCTGCGGTTGGGAGACGCGAATGCGCTGAAATCCCCCAGCCCTTTCTCATAGCCGCCGGCCTGCAGGCTCTCCTTCCCGCACTCCCGCCGGCACGGGTCGAACCCCTTCTCGCCACAGCCGAAGTCCTCCCGGTGCACGAAAGAATTGCCCTTGTACACGGGCTCCTCGGCGTAGGAGCACTTCGCAAAGCGAGAGGACTGAGGGCCAGCGGGGCCGTCGGGCTCCTTCTTGCCGTCACAGAGCCAGGAGTCCACGAGGCTGAGGCCCTGGAAACCCTGATACAGGCTCTCCGTGTGGTTCTCCGGCATCTTCTGCACGCGGTCTTGATAGAAGCCGTTCACGTCCGAGAAATCCGAGGAGCCGTTTCTCCCGAGCTTGGTCTTCTCCGGGTGGTGCGCGTAACCATCGCTCTCCGCCGGCCACGAGGGGAACAACTTGGAGGACGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39125 True 1852 lncRNA 0.65 1 2494716 2496567

Neighbor

gene id symbol gene type direction distance location
AMCG00019085 NA coding downstream 9977 2471464 ~ 2484739 (-)
AMCG00019084 smarcd3,LOC106578675 coding downstream 60641 2409940 ~ 2434075 (-)
AMCG00019077 abcf2 coding downstream 107567 2380537 ~ 2387149 (-)
AMCG00019079 NA coding downstream 136861 2342598 ~ 2357855 (-)
AMCG00019080 NA coding downstream 182316 2303870 ~ 2312400 (-)
AMCG00019087 NA coding upstream 24346 2520913 ~ 2525129 (-)
AMCG00019092 NA coding upstream 141933 2638500 ~ 2657544 (-)
AMCG00019091 arf1,arf3,LOC103038497,LOC102781726,LOC107671731 coding upstream 179748 2676315 ~ 2686173 (-)
AMCG00019093 wnt3a,LOC107661901 coding upstream 261533 2758100 ~ 2759745 (-)
AMCG00019094 wnt3a coding upstream 272213 2768780 ~ 2785358 (-)
G31244 NA non-coding downstream 661 2493837 ~ 2494055 (-)
G31236 NA non-coding downstream 14301 2479938 ~ 2480415 (-)
G31234 NA non-coding downstream 19733 2474684 ~ 2474983 (-)
G31218 NA non-coding downstream 84836 2404414 ~ 2409880 (-)
G31137 NA non-coding downstream 317750 2176162 ~ 2176966 (-)
G31246 NA non-coding upstream 3566 2500133 ~ 2509194 (-)
G31296 NA non-coding upstream 64908 2561475 ~ 2562794 (-)
G31300 NA non-coding upstream 70234 2566801 ~ 2571288 (-)
G31329 NA non-coding upstream 138617 2635184 ~ 2638120 (-)
G31346 NA non-coding upstream 357881 2854448 ~ 2856659 (-)
G31130 NA other downstream 316066 2177980 ~ 2178650 (-)
G31082 NA other downstream 411445 1932341 ~ 2083271 (-)
AMCG00019059 NA other downstream 598284 1882454 ~ 1896432 (-)
G31035 NA other downstream 784173 1705899 ~ 1710543 (-)
AMCG00019034 NA other downstream 1171120 1321614 ~ 1323596 (-)
AMCG00019109 NA other upstream 1723876 4220443 ~ 4229991 (-)
AMCG00019129 NA other upstream 2435782 4932349 ~ 4940667 (-)
AMCG00019128 gorasp1,LOC103377203 other upstream 2444492 4941059 ~ 4986384 (-)
AMCG00019165 NA other upstream 4184058 6680625 ~ 6684301 (-)
AMCG00019209 LOC106600477 other upstream 6350584 8847151 ~ 8901878 (-)

Expression


Co-expression Network